Plantactinospora sp. BC1: C6361_22215
Help
Entry
C6361_22215 CDS
T05377
Name
(GenBank) RNA polymerase subunit sigma-70
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
plab
Plantactinospora sp. BC1
Brite
KEGG Orthology (KO) [BR:
plab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
plab03021
]
C6361_22215
Transcription machinery [BR:
plab03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
C6361_22215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
SnoaL_2
Sigma70_r4
DUF4440
SnoaL_3
SnoaL_4
SnoaL
Sigma70_ECF
NTF2
HTH_16
Motif
Other DBs
NCBI-ProteinID:
AVT31734
LinkDB
All DBs
Position
5083163..5084209
Genome browser
AA seq
348 aa
AA seq
DB search
MGTGHDDLLVAAARDGDESAFTTLVERHRRELRVHCYRMLGSYHDAEDLVQETFLRAWKN
IAGFQGRATIRAWLYRIATNACLDALDGRTRRMLPHHLSGPSNPDDDLAPPTDIHWLQPF
PDRLWEPAAPSETEPDAVAVTRETIELAFLAAIQHLPPRQRAVLILRDVLGWPASQTATL
LDNSVASVNSALQRARATIREHLPERRLDWAPTAAPSEEERAVLRRYVDALERADLATVA
ELLAEDVRTTMPPYPTWFRGRESVLRALATSWDPALPGYVGRFRTLPTRANGRPAVATYV
RRPGEPDHRPFAISVFWFGGGQITEIVAFHDPGLFPAFALPPSLPGHR
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
gtggggaccgggcacgacgacctgctcgtcgcggcggcgcgggacggcgacgagtccgcg
ttcacgaccctggtggagcggcaccggcgggagctgcgggtgcactgctaccggatgctc
ggctcctaccacgacgccgaagacctggtgcaggagacgttcctgcgcgcgtggaagaac
atcgccggcttccagggccgcgccacgatccgggcctggctctaccggatcgccaccaac
gcctgcctggacgcgctcgacggccggacccgtcggatgctcccgcaccacctgagcggc
ccgtcgaacccggacgacgacctggcgccgcccaccgacatccactggctccagccgttc
ccggaccggctgtgggagccggccgcgccgagcgagaccgaaccggacgccgtggcggtc
acccgggagacgatcgagctggcgttcctggccgcgatccagcacctgccgccgcgacag
cgggccgtactgatcctgcgggacgtgctcggctggccggccagccagaccgcgaccctg
ctcgacaactccgtggcgtcggtgaacagcgccctgcaacgggccagggccacgattcgg
gagcacctgccggagcgccgcctcgactgggcgcccacggcggcacccagcgaggaggag
cgggcggtgctgcgccgctacgtcgacgcgctggagcgtgccgacctggccacggtggcc
gagctgctggccgaggacgtccggacgacgatgccgccgtacccgacctggttccggggg
cgggagtcggtgctgcgggcgctggcgacgagctgggatccggcactgccggggtacgtc
ggccggttccggaccctgccgacccgggcgaacgggcgccccgcggtggccacgtacgtc
cggcggcccggagaacccgaccaccggccgttcgcgatctccgtgttctggttcgggggc
ggtcagatcaccgagatcgtcgcgttccacgaccccgggctgtttccggcgttcgcgctg
cctccgtcgctgccaggccaccgatga
DBGET
integrated database retrieval system
