Plantactinospora sp. BC1: C6361_23740
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Entry
C6361_23740 CDS
T05377
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
plab
Plantactinospora sp. BC1
Brite
KEGG Orthology (KO) [BR:
plab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
plab03032
]
C6361_23740
03400 DNA repair and recombination proteins [BR:
plab03400
]
C6361_23740
Enzymes [BR:
plab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
C6361_23740
DNA replication proteins [BR:
plab03032
]
Prokaryotic type
DNA Topoisomerases
C6361_23740
DNA repair and recombination proteins [BR:
plab03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
C6361_23740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
AVT31989
LinkDB
All DBs
Position
complement(5440026..5441006)
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AA seq
326 aa
AA seq
DB search
MRLRRSDLSAPGYGRRRHGRGVVFLDTQGRPIRDRDELTRLRELVIPPAWKDVWICPHPA
GHIQAVGTDAAGRRQYLYHPTWRARRDQAKFDHVLEVAGRLPVLREQVCADLAGRGLRRP
RVLATVARLLDMGTFRIGSDQYAAGDDPTFGVATLRPEHTRTRHGAVVFEFPAKGGIDQV
CRVDDTEACRVLRELRRRRRAAQRLFGYWDGRSWRDVRSDEVNDYLRTASGGEMTAKDFR
TWHATLWASRALAEAGPQRSVTARRRVIAEAMRRVSGRLGNTPAVARASYVDPRLIDLYQ
NGTVAEVGPESTDADAERAVLALLAR
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
gtgcggttgcggcgtagcgacctctccgcccccgggtacgggcggcgccgacacggtcgc
ggcgtggtcttcctggacacgcaggggcggccgatccgggaccgggacgagctgacccga
ctccgcgaactcgtgatcccgcccgcctggaaggacgtctggatctgcccgcatccggcc
gggcacatccaggcggtcggcacggacgcggccggacgccgccagtacctctaccacccg
acctggcgggcccggcgggaccaggcgaagttcgaccacgtactggaggtcgccggccgg
ctgccggtgttgcgggaacaggtctgcgccgacctggccgggcggggcctgcgccggccc
cgggtgttggcgaccgtggcccggctgctcgacatgggcaccttccggatcggcagcgac
cagtacgcggccggcgacgacccgacgttcggggtcgccacgctccggccggagcacacc
cgtacccggcacggcgcggtggtcttcgagtttccggccaagggcggcatcgaccaggtg
tgccgggtcgacgacaccgaggcgtgccgggtgctgcgggaactgcgtcgacggcggcgt
gccgcccagcggctattcggctactgggacggccggagctggcgggacgtgcgcagcgac
gaggtgaacgactacctgcggacggccagcgggggcgagatgacggcgaaggacttccgc
acctggcacgcgacgctctgggcgtcccgggcgctcgccgaggcggggccgcagcggtcg
gtgacggcccgccgtcgggtgatcgccgaggcgatgcgtcgggtctccggccggctcggc
aacaccccggcggtggcccgggcatcctatgtggacccccggctgatcgacctctaccag
aacgggacggtcgccgaggtgggcccggagagcaccgacgccgacgccgaacgcgccgtc
ctggccctgctggcccgctga
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