Plantactinospora sp. BC1: C6361_24205
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Entry
C6361_24205 CDS
T05377
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
plab
Plantactinospora sp. BC1
Pathway
plab03030
DNA replication
plab03410
Base excision repair
plab03420
Nucleotide excision repair
plab03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
plab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
C6361_24205
03410 Base excision repair
C6361_24205
03420 Nucleotide excision repair
C6361_24205
03440 Homologous recombination
C6361_24205
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
plab03032
]
C6361_24205
03400 DNA repair and recombination proteins [BR:
plab03400
]
C6361_24205
Enzymes [BR:
plab01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
C6361_24205
DNA replication proteins [BR:
plab03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
C6361_24205
DNA repair and recombination proteins [BR:
plab03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
C6361_24205
NER (nucleotide excision repair)
GGR (global genome repair) factors
C6361_24205
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
HHH_5
DNA_pol_lambd_f
HHH
Motif
Other DBs
NCBI-ProteinID:
AVT32067
LinkDB
All DBs
Position
5550979..5553666
Genome browser
AA seq
895 aa
AA seq
DB search
MTASTPRLLLLDGHSLAYRAFFALPVENFSTTTGQPTNAVYGFTSMLINVLRDERPTHIV
VAFDVSRRSFRTERYAEYKAGRSETPGEFAGQVSLVKEVLAALRVPTVEKPGYEADDVLA
TLACQGRDAGMEVLICTGDRDAFQLIDDRTTVLYPRKGVSDLARMDRAAVTERYGVGPEQ
YRDLAALVGETSDNLPGVPGVGPKTAAKWILQYGGVEGVVARADEIKGKAGDNLRERLAD
VIRNYEINCLVSDLELPLRAEETRWQGWDREAVHQVFDTLEFRILRDRLYQYLDAVEPEA
ESGFDLSGRVLPTGEVAGWLAEHVRPGTPVGVAVAGSFGRGTGALTGVALATATGVAGWF
DPAGLAPADEAAVADWLADPERPKVLHDSKPARLAFAAHGWTLRGVARDTALAAYLARPD
QRSYDLTDLALRYLHRELKVDAPETGQLAFDGLGNDGEVEQNLMLRARATLDLADAIGAE
LSRDGEQSARLLDEVEQPLIEVLAAMERTGIAADTDYLSELEAHFAGEVKAVAQAAYGVI
GREFNLGSPKQLQEILFTELGLPKTKKIKTGYTTDADALQWLYAQQPHPLLEHLLRHRDV
ARLKSTVDGLLKSVSDDGRIHTTFHQTVAATGRLSSTDPNLQNIPIRTEEGRRIRRAFVV
GPGYDCLLTADYSQIEMRIMAHLSCDAALIEAFNSGADFHAATASSVFGVSVAEVTPDQR
RKIKAMNYGLAYGLSAFGLGQQLGIAADEARALMEEYFSRFGGVRDYLQTVVKKAVKDGY
TETILGRRRYLPDLVSDNRQRRDMAERMALNAPIQGSAADIIKVAMLHVDTALRDSGLRS
RMLLQVHDELVFEVAPGERADLEALVRREMGGAYPLAVPLEVSVGVGSDWNSADH
NT seq
2688 nt
NT seq
+upstream
nt +downstream
nt
gtgacagcctccacgccgcgcctgctgctgctcgacggtcattcgctcgcataccgggcg
ttcttcgccctgccggtggagaacttctccaccacgaccgggcagccgaccaacgcggtc
tacggcttcacctcgatgctgatcaacgtgctccgcgacgagcgccccacgcacatcgtg
gtggccttcgacgtctcccggcggtcgttccggaccgagcgctacgccgaatacaaggcc
ggccgctccgagacgccgggcgagttcgccggccaggtcagcctggtcaaggaggtgctg
gccgcgctacgggtgccgacggtggagaagccgggctacgaggccgacgacgtgctcgcc
accctcgcctgccagggccgggacgccggcatggaggtgctgatctgcaccggcgaccgg
gacgcgttccaactcatcgacgaccggaccaccgtgctctacccccgcaagggcgtctcc
gacctggcccggatggaccgggcggcggtcaccgagcgctacggtgtcggcccggagcaa
taccgcgacctcgccgcgctggtcggcgagaccagcgacaacctccccggcgtgccgggg
gtgggcccgaagacggccgcgaagtggatcctccagtacggcggcgtcgagggcgtggtc
gcccgggccgacgagatcaagggcaaggccggcgacaacctgcgcgaacggctcgccgac
gtgatccggaactacgagatcaactgtctggtctccgacctggagctgccgctgcgcgcc
gaggagacccgctggcagggctgggaccgggaggcggtgcaccaggtcttcgacaccctg
gagttccgcatcctgcgggaccggctctaccaatacctggacgccgtggagcccgaggcc
gagtccgggttcgacctctccggcagggtcctgccgaccggtgaggtggccggctggctc
gccgagcacgtgcggcccggcaccccggtcggggtcgccgtcgccggctcgttcggccgg
ggcaccggcgcgctgaccggcgtcgcgctggccaccgcgaccggggtggccggctggttc
gacccggccggcctggccccggccgacgaggcggcggtggccgactggctcgccgacccg
gaacgccccaaggtgctgcacgacagcaagccggcgcggctcgccttcgccgcgcacggc
tggacgctgcgcggggtggcccgggacaccgcgctcgccgcctatctggcccgccccgac
cagcgctcctacgacctgaccgacctcgccctgcgctacctgcaccgggagctgaaggtc
gacgcgccggagaccggccagctcgccttcgacggcctcggcaacgacggcgaggtcgag
cagaacctgatgctccgggcccgggccaccctggatctggccgacgcgatcggcgccgaa
ctgtcccgggacggcgagcagtccgcccgcctcctcgacgaggtggagcagccgctgatc
gaggtgctcgccgcgatggagcggaccggcatcgccgccgacaccgactacctctcggag
ctggaggcgcacttcgccggtgaggtcaaggcggtggcccaggcggcgtacggggtgatc
gggcgggagttcaacctcggctcgcccaagcagttgcaggagatcctcttcaccgagctc
ggcctgcccaagaccaagaagatcaagaccggttacaccaccgacgccgacgcccttcag
tggctctacgcgcagcagccgcacccgctgctggagcacctgctccggcaccgcgacgtg
gcccggctcaagtccaccgtcgacggcctgctcaagtcggtctccgacgacggccggatc
cacaccaccttccaccagacggtggcggcgaccggccggctctcctccaccgaccccaac
ctgcagaacatcccgatccgcaccgaggagggccggcggatccgccgggccttcgtggtc
gggccgggctacgactgcctgctcaccgccgactacagccagatcgaaatgcggatcatg
gcgcacctctcctgcgacgccgcgctgatcgaggcgttcaactccggcgccgacttccac
gccgcgaccgcctcctcggtcttcggggtgtcggtggccgaggtgacgccggaccagcgg
cgcaagatcaaggcaatgaactacggactggcgtacgggctgagcgcgttcggcctcggc
cagcagctcgggatcgccgccgacgaggcccgcgcgctgatggaggaatacttcagccgc
ttcggcggggtccgggactacctccagacggtggtgaagaaggcggtcaaggacggctac
accgagaccatcctcggccgtcggcgctacctgcccgacctggtcagcgacaaccggcag
cgccgggacatggccgagcggatggcgctcaacgccccgatccagggttcggcggccgac
atcatcaaggtggcgatgctgcacgtcgacaccgcgctgcgcgattccggactgcgctcc
cggatgctgctccaggtgcacgacgaactcgtcttcgaggtggcacccggcgagcgggcc
gaccttgaggcgctggtccggcgcgagatgggcggcgcctatccgctggccgtaccgctg
gaggtctcggtcggcgtcggttcggactggaacagcgccgaccactga
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