Plantactinospora sp. BC1: C6361_28155
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Entry
C6361_28155 CDS
T05377
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
plab
Plantactinospora sp. BC1
Pathway
plab03030
DNA replication
plab03430
Mismatch repair
plab03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
plab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
C6361_28155
03430 Mismatch repair
C6361_28155
03440 Homologous recombination
C6361_28155
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
plab03032
]
C6361_28155
03400 DNA repair and recombination proteins [BR:
plab03400
]
C6361_28155
Enzymes [BR:
plab01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
C6361_28155
DNA replication proteins [BR:
plab03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
C6361_28155
DNA repair and recombination proteins [BR:
plab03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
C6361_28155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
Fim1F_C
Ifi-6-16
Motif
Other DBs
NCBI-ProteinID:
AVT32696
LinkDB
All DBs
Position
complement(6414851..6418387)
Genome browser
AA seq
1178 aa
AA seq
DB search
MSDSFVHLHVHTEYSMLDGAARLKELFAETNRLGMPALAMTDHGNLFGAYDFHKQATAAG
VKPIIGSEMYLTPGTDRRERTRVRWADGGENDVSGGGAYTHMTMLAGDADGLRNLFRMQS
RASLEGYYFKPRADRELLHQYGKGIIATTGCPSGEVQTWLRIGNFDKACESAAEFRDIFG
AENYYLEVMDHGLDIETRIRQDLIRLGKKLNLKPVATNDLHYTYEKDADAHEVLLCVQSG
STLADPKRFKFDARDFYLKSAAEMRALWDSEVPGACDSTLEIAERIGDYSELFAPRNLMP
QFPVPAGETEETFLRKEVMRGLERRFPGGVPEDRRRQAEYELDVILKMGFPGYFLVVADL
VAYAKREGIRVGPGRGSAAGALIAYALGITELDPMAHGLLFERFLNPDRVSMPDIDMDFD
ERRRGDMIRYATEKYGEERVAQIITYGTIKAKAAIKDAARVLGYPFAMGDRITKAMPPAV
MGKDIPLGGIFDPGHPRYPEAAEFRQLYDGDGEVRKVVDTAKGLEGLKRQWGVHAAGVIL
SRDPLVDVLPIQKREQDGSIITQWDMGACETIGLLKMDFLGLRNLTIMDDALEAIRENRG
EDLVLEDLPLDDKATYALLGRGDTLGVFQFDGGPMRALLRSMAPDNFEDISAVGALYRPG
PMGANAHNEYADRKNNRKPVVPIHPELADSLAEILGDTYGLIVYQEQVMAIAQKVAGYSL
GKADLLRRAMGKKKKEILDKEFAPFAAGMKDNGYSDAAIKTLWDILVPFSDYAFNKAHSA
AYGVVSYWTAYLKANYPAEYMSALLTSVGDDKDKSAVYLAECRRMGIKVLPPDVNESNAR
FAAVGQDIRFGLAAVRNVGANVVESIRRSRKEKGNFTDFYDYLRKVDAVACNKKTVESLI
KAGAFDSLGHTRKGLLAVHTDAIDSFIALKRNEAVGQYDLFGDAFGGGDDGGGGGMVVTP
PIPTGEWDKTDLLTFEREMLGLYVSDHPLFGVEHVLAAAADMSISALAEEGGVADGQVVN
LAGILSGVQRRITKQGRAWASATLEDLGGAVEVLFFPNTYELVGQYIAEDAIVVVKGRID
RRDDQPRLMAMDLSMPDITAPDEVKPVVLALPPSRCTPPLVERLREVLASHPGSAEVHVK
LVNGSRATLLRLSPLRVAPTTALMADLKALLGPSAVAG
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
gtgtctgactcgttcgtgcacctgcacgtgcacaccgagtattcgatgctcgacggggcg
gcccggctcaaggagttgttcgccgagaccaaccggctgggcatgccggcgctggcgatg
accgaccacggcaacctcttcggcgcgtacgacttccacaagcaggccacggccgccggg
gtgaagccgatcatcggcagcgagatgtacctcacgccggggaccgaccggcgggagcgg
acccgggtccgctgggccgacggcggcgagaacgacgtctccggcggtggcgcctacacc
cacatgaccatgctggccggggacgccgacgggctgcgcaacctgttccggatgcagtcc
cgggccagcctggagggctactacttcaagccgcgggccgaccgggagctgctgcaccag
tacggcaaggggatcatcgccaccaccggctgcccgtcgggcgaggtgcagacctggctg
cggatcgggaacttcgacaaggcgtgcgagtcggcggcggagttccgggacatcttcggg
gcggagaactactacctggaggtgatggatcacgggctcgacatcgagacccggatccgg
caggacctgatccggctgggcaagaagctcaacctgaagccggtggccaccaacgacctg
cactacacctacgagaaggacgcggacgcgcacgaggtgctgctctgcgtgcagtccggc
tcgacgctggccgacccgaagcggttcaagttcgacgcccgggacttctacctgaagtcg
gcggccgagatgcgcgcgctctgggactcggaggtgccgggggcctgcgacagcacgctg
gagatcgcggagcggatcggcgactactccgagctcttcgcgccgcgcaacctgatgccg
cagttcccggtgccggcgggggagaccgaggagaccttcctgcgcaaggaggtgatgcgc
gggctggagcggcgcttcccgggcggggtgccggaggaccgtcggcggcaggccgagtac
gagctcgacgtgatcctcaagatgggcttcccgggctacttcctggtcgtcgccgacctg
gtcgcgtacgccaagcgggaggggatccgggtcgggccggggcgtggttcggcggcgggc
gccctgatcgcgtacgcgctcggcatcaccgagctggacccgatggcgcacggcctgctc
ttcgagcggttcctcaaccccgaccgtgtctcgatgcccgacatcgacatggacttcgac
gagcgtaggcgcggcgacatgatccgctacgccaccgagaagtacggcgaggagcgggtc
gcccagatcatcacgtacggcacgatcaaggcgaaggcggcgatcaaggacgcggcccgg
gtcctcgggtacccgttcgcgatgggcgaccggatcaccaaggcgatgcccccggcggtg
atgggcaaggacatcccgctcggcggcatcttcgacccgggccacccgcgctatcccgag
gcggccgagttccggcagctctacgacggcgacggcgaggtacgcaaggtcgtcgacacc
gccaagggcctggaggggctgaagcggcagtggggggtgcacgcggccggggtgatcctg
tcccgggatccgctggtcgacgtgctgccgatccagaagcgcgagcaggacggctcgatc
atcacccagtgggacatgggtgcctgcgagaccatcggcctgctcaagatggacttcctg
ggcctgcgcaacctgaccatcatggacgacgcgctggaggcgatccgggagaaccggggc
gaggacctggtgctggaggacctgccgctggacgacaaggcgacgtacgccctgctcggc
cggggtgacaccctcggggtgttccagttcgacggcggtccgatgcgggcgctgctgcgc
tcgatggcgccggacaacttcgaggacatctcggcggtcggcgcgctctaccggcccggt
ccgatgggcgccaacgcgcacaacgagtacgccgaccgcaagaacaaccgcaagccggtg
gtaccgatccaccccgaactcgccgactccctcgcggagatcctcggcgacacctacggg
ctgatcgtctaccaggagcaggtcatggcgatcgcccagaaggtggccggctactcgctc
ggcaaggccgacctgctgcgccgggcgatgggcaagaagaagaaggagatcctcgacaag
gagttcgcgccgttcgccgccggcatgaaggacaacggctacagcgacgcggcgatcaag
acgctctgggacatcctggtcccgttctccgactacgcgttcaacaaggcgcacagcgcg
gcgtacggcgtcgtctcctactggaccgcctacctgaaggcgaattatccggcggagtac
atgagcgcgctgctcacctccgtcggcgacgacaaggacaagtcggcggtctacctggcc
gagtgccggcggatgggcatcaaggtgctgccgccggacgtcaacgagtccaacgcccgg
ttcgccgccgtcggccaggacatccggttcgggctggccgccgtccgcaacgtcggcgcg
aacgtggtcgagtcgatccgccggtcccgcaaggagaagggcaacttcaccgacttctac
gactacctgcgcaaggtcgacgcggtggcctgcaacaagaagaccgtcgaatcgctgatc
aaggcgggtgcgttcgactcgctcgggcacacccgcaaggggctgctcgccgtacacacc
gacgcgatcgactcgttcatcgcactcaagcgcaacgaggcggtcggccagtacgacctc
ttcggcgacgcgttcggcggcggggacgacggcgggggcggcggcatggtggtgaccccg
ccgatcccgaccggcgagtgggacaagaccgacctgctcaccttcgaacgcgagatgctc
ggcctctacgtctccgaccatccgctcttcggcgtcgagcacgtgctcgccgccgccgcc
gacatgtccatctcggcgctggccgaggagggcggggtcgccgacgggcaggtggtcaac
ctggccggcatcctctccggggtgcagcgccggatcaccaagcagggccgggcatgggcc
tcggcgaccctggaggatctcggcggcgcggtcgaggtgctcttcttcccgaacacctac
gaactggtcgggcagtacatcgccgaggacgcgatcgtggtggtcaagggccggatcgac
cgccgcgacgaccagccccggctgatggcgatggacctgtcgatgcccgacatcaccgca
ccggacgaggtcaagccggtggtgctggccctgccgccgtcccgctgcacgccgccgctg
gtggagcggctccgcgaggtgctggccagccatcccggctcggccgaggtgcacgtcaag
ctggtcaacggctcccgggccaccctgctgcggctcagcccgctccgggtggctcccacc
accgcgctgatggccgacctcaaggcgctgctcggaccgagcgccgtcgcgggctga
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