Plantactinospora sp. BC1: C6361_29885
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Entry
C6361_29885 CDS
T05377
Name
(GenBank) sugar-binding protein
Organism
plab
Plantactinospora sp. BC1
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
DUF6443
Motif
Other DBs
NCBI-ProteinID:
AVT32969
LinkDB
All DBs
Position
complement(6813772..6820269)
Genome browser
AA seq
2165 aa
AA seq
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MSRFGRSRLSACGRTAIAFVAAGALLAGMLTATPAQAKPPEQTAPTPSPGPSVKGVKPLP
TKFVTPPNAAKDSYRPTRTAWPKAATSQLDLADVVGRAATPVKVRAADTPVWAQPVPRNG
SYEGPGQVEVRVADRAAAKAAGVDGVLLSLRPETAQGSGVVRVGVDYAGFAETFGGNFGS
RLRLVRLPACALTTPRVTSCRMGSPLVSSNDVSAQSVSAEISLPAGGPQNRSADDATVVL
AAVADPGDEGGAGGTYAATDLKPSGSWTGGGSTGSFTYSYPMDVPPAASDLAPTLALSYD
SASVDGQTASTNAQASWAGDGWSTGRSFIEQTFASCQDEPGGKASPVKTYDRCWDGPVLT
MSLNGSSTSLVWDADKEIWKPELDDGEVITRVTNSNNGSGTYNTDYWRVTLRDGTVYEFG
RNRLPGWTSGKPETKSVDHTPVYSPHSGDPCYNSAGFSSSVCTMAYRWSLDHVVDVHGNA
MAYYYGQDTNFYGRNKGATDVSYIRDSWLTRIDYGFRDGGAYGTVPNRVLFHTGERCLSG
TCQPLNSANKANWPDVPFDLICASGTDCDDWSPSFFSTVRLTSVETQQWNTGTSKHEKVD
SYALTHTMPATGDGTSPTLWLSSITRTGHDLSAGGTAAITMPSVSFSGIKLPNRVDIAGG
LPSYYRQRISAITTETGSVIAPSYELPVPCTAPVTQSPASNTKSCYPVYWTPDGYVNPHR
DWFNKYAVTRVTSTDPTGGAPALTISYKYLDGAAWRYDENEVVKAKYRTYGQFRGYAKVQ
TFTGDGVNDRRTMSQTTYYRGMSKNNSTTAVNLTDSAGGVHEDVDEFAGRVLETTEYLGE
NGRIDSSTINSYWASGATATRSRTGLPALTAQWVQPVKTYTRKAVTSGATPTWRYTAMEH
SYDANTASATLGSLKHTYTYTVPTNPAFDQCTTYTYAPPNTGKNLVGLPAQVETAAVACG
GFTTGSPASEPGSVNTLTAPTSLSRPDQVVKAERTFYDDTEFALTFPQASAPTKGNVTMT
RTATDYTANGYVWQTTERGTYDTYGRPEDSFDAKGNKSTLGYTMNTVGLTTGTSSTNALQ
QTSSATVNPRRGSTLTSTDANSTITRQQYDAVGRTTSVWLHSRTTSSPANHTFTYTVSKT
GVTAVTNRSLNLANGYRTSVTLYDAMLRERQTQAMTPAGGRMITDTFYDSRGWARASYNG
WWDTTSLPAVSSPVSAADLGKQVPNQTFTTYDGLGRAVVVEAAKNGLTISSTTTVYHGDR
ITVVPPDGGTVATTVTDPLDRKTQLVEYTSRPTVTAPQDTFTGTYTVTGGTTTTSSYGYD
VRGNQATLTDAADNVWASTYNLLGQLVSRTDPDAGTTTMSYDANGNLQQTTDGRGKTLSF
THDALDRETGEYAATVTNQAPANQRAKWIYDNSNNVPGVTNPVGQPTTTIAYRDGHAYTT
QQKGFNVFGKSLGVTITIPDVEGALSGSYVFGHTYNSVLGLPFTDTYPAKGSLPAETVLH
GYGDLDLPDSLVGLAAYTQYVTYDAWGRVNQQKIGSATNFALVTNTYDTHTGRLTNQVVS
KATSGTIATPLDEQEYRYDLYGKINRKISKRNGASTPAETQCYGYDGLNRLTEAWTATDN
CTTAPTAGNRTMIGNTIGSGSAYWTSWEIDAIGNRTKQIQRNLTGGNDTTTTYTYNGNGQ
NKPHTLTATSAVTGAAAYTYDAAGNMTGRNAAEGNQTLDWDDAGKLVSVTGGTTGTNTFL
HDADGNLLLQKEPTKTTLYLPGQQLTLNTTTGAIDGNRYHALPGGGTCIRSGASAGYTFA
LADHQGTPTLYLDSTAQVPTWRQYTPYGAPRGIVGTYPDNRGFLNKPMSPTGLTTIGARA
YDPTIGRFISVDPIQDLFDAQQWNGYSYSNNSPITRSDPTGLISDEVAAGRMTQREAKDH
QEKIWGPKKDDWKKGSGGKPKRTYRCAERPGGCVSRPGSPLYQNRLGACVDAAGTGVACP
SRPSPTPQTYVRPTPPKPKKECKAWAWVCSTGKWLKDNRNAIVAGAGIVAMGACVVATAG
VCGAVAGGAALVSIGYRAYDLSQTDMGAADWGKFAIGTATDVALTRIPTAKVPIRGMNKP
FRGHLDIPLGEVGAKLTGATKVHLRAGRYEQAYRIDPLRATNVVAGWAIGTNHDPLTNAY
SQIVD
NT seq
6498 nt
NT seq
+upstream
nt +downstream
nt
atgagcaggttcggccggtcacgcctgtccgcatgcggacggaccgccatcgcctttgtt
gccgccggtgcgctgctagcgggaatgctgaccgcgacaccggcacaggccaagccgccg
gagcagacggcgcctactccgtcaccgggtccgtcggtgaagggcgtcaagccgttgccg
acgaagttcgtgactccgccgaacgcggcgaaggactcctaccggcccacccgaacggcg
tggccaaaggcggcgacgtcccagctggacctcgccgacgtggttggccgggcggccacg
ccggtgaaggtgcgggccgccgatactcccgtgtgggcgcagccggtgccgcgtaatggc
tcgtacgaggggcccggccaggtcgaggtgcgcgtggccgaccgcgccgccgccaaggcc
gccggtgtcgacggggtgctgctgtcgctacgaccagaaacagcgcaggggtccggcgta
gtgcgagtcggagtggactacgccgggttcgcggagacgttcggcgggaacttcggctcg
cggctgcgtctggtacgacttccggcgtgtgcgttgacgacgccgcgcgtgacctcgtgt
cgtatgggctcgccactggtgtcatcgaacgatgtgtcggcgcagtcggtgtcggcggag
atatcactgccggcgggcggtccgcagaaccggtccgccgatgacgccacagtcgtgttg
gctgcggtcgccgacccgggcgacgagggcggcgccggcggcacgtacgcggccacggac
ctgaagccgtcggggtcctggaccggcggtgggagcacgggctcgttcacctactcgtac
ccaatggacgtgccgccggcggcgtcggacctcgcaccgacgctggcactgtcgtacgac
tcggcgagcgtggacggccagacggcatcgaccaacgcgcaggcgtcgtgggccggcgat
ggctggtcgacgggccggtccttcatcgagcagacgttcgcgtcgtgccaggacgagccc
ggaggcaaggcgtcgccagtgaagacgtacgaccggtgctgggacggcccggtgctgacg
atgtcgctgaacgggtcgtcgacgtcgctggtgtgggacgccgataaggagatttggaag
ccggaactggacgacggcgaggtcatcactcgggttacgaattcgaacaacggttccggt
acttacaataccgactattggcgggtgacgctgcgcgacggaactgtctacgagttcggc
cgcaaccgcctacccggctggacctccggaaagccggaaacgaaatccgtggaccacacg
cccgtgtactctccgcattcgggagatccctgctacaactcggcaggcttctcatcatcg
gtgtgcacaatggcgtaccggtggagcctcgaccacgtggtcgacgtccacgggaacgcg
atggcgtactactacgggcaggacacgaacttctacggccggaacaagggcgcaaccgac
gtgtcctacatccgcgactcgtggctgacccggatcgactacggattccgcgacggcggc
gcgtacgggacggtgccgaaccgggtgctgttccacaccggagagcggtgcctgtccggg
acgtgtcaaccgttgaactcggcgaacaaggcgaactggcccgacgtcccgttcgacctc
atctgcgcctcagggacggactgcgacgactggagcccgtcgttcttctccacggtacgg
ctgacgtcagtcgagacccagcagtggaacaccggcaccagcaagcacgaaaaagtcgac
tcgtacgcgttgacccataccatgccggcgacgggcgacggcacatcccccacattgtgg
ctgtcgtcgatcacccgcaccgggcacgatctgagcgcgggcgggacggcggcgatcaca
atgccgtcggtgagcttcagcggaatcaaactgcccaaccgggtcgacatcgcgggcggg
ttgccgtcgtactaccggcagcggatctcggcgatcaccaccgaaaccggatcggtaatc
gccccgagctacgaactgccggtgccgtgcaccgcccccgtcacccagtcaccagcatcc
aacacgaagtcgtgctaccccgtctactggacaccggacggatatgtgaacccgcaccga
gactggttcaacaagtacgcggtgacccgggtgacctccaccgacccgaccggcggcgcc
ccggccctcactatcagctacaagtacctcgacggcgcggcgtggcggtacgacgaaaac
gaggtcgtcaaagccaaataccgcacctacggccagttccgcggctacgccaaggtccag
acgttcaccggggacggcgtcaacgaccgccgcaccatgtcacagaccacctactaccgg
ggcatgtcaaagaacaactcgacaacggccgtgaacctcaccgactcggccggtggagtg
cacgaggacgtcgacgagttcgccggccgggtgctggagaccaccgagtacctgggcgag
aacgggcggatcgactcgtcgacgatcaactcgtactgggcgtccggcgccaccgccacc
cgcagccgcaccggactacccgcgctgacggcacagtgggtgcagccggtcaagacttac
acccgaaaagcggtcaccagcggcgcaacgccgacttggcggtacacggcgatggagcac
agctacgacgcgaataccgccagcgcgactctcggctcgctcaagcacacctacacctac
accgtgccgaccaaccccgccttcgaccagtgcaccacctacacctacgccccgccgaat
actggaaagaacctggtcggtcttcccgcccaagtggagaccgccgccgtggcgtgcggc
gggttcaccaccggcagcccagcatcggagccgggcagcgtgaataccttgaccgcaccg
acgtcgctaagccggccggatcaggtggtgaaggccgaacggaccttctacgacgatacg
gagttcgctctcacgttcccccaggcgtccgcgcccacgaaggggaacgtgacgatgacc
cgcacggcgacggactacaccgccaacggctacgtgtggcagaccaccgaacgcggcacc
tacgacacctacggccggccagaggacagcttcgacgccaagggcaacaagtccaccctc
ggctacacgatgaacacggtaggcctaacgaccggcacatcgagcaccaacgccctccaa
cagacctcatccgccacagtgaacccacgccgtggcagcacgctgaccagcaccgacgcc
aacagcacgattacccgccagcagtatgatgcggtaggccggaccacatcggtctggctg
cactcacggacgacgagcagcccggcgaaccacacctttacctacacggtctcgaagacc
ggcgtcacggcggtgacgaaccgaagcttgaacctcgcgaacggctatcggacctcggtg
accttgtacgacgccatgctgcgggagcggcagacgcaggcgatgacgccagccggcggc
cggatgatcaccgacacgttctacgactcccgaggctgggcccgggcctcctacaacggc
tggtgggacactaccagcctgcccgccgtgagcagcccagtatcggcggcggacctcggc
aagcaggtgccgaaccagaccttcaccacctacgacggcctgggccgagcggtcgtcgtt
gaggcagcaaagaatggcttgaccatctcgtcgaccacgaccgtctatcacggtgaccgc
atcaccgtcgtcccgccggacggaggaacggtggccaccaccgtcaccgaccccttggac
cgcaagacgcagttggtcgagtacacgtcccggccgacggtgaccgcaccgcaggacacg
ttcaccggcacgtacacggtcaccggcggtaccacaaccaccagcagctacggctacgac
gtacgcggcaaccaggccaccctgaccgacgcagcggacaacgtctgggcgtcgacgtac
aaccttctcggccagctggtcagccggactgaccccgacgccggcaccaccacgatgagc
tacgacgccaacggcaacctgcagcagacgactgatggacgcggcaagacgctgtcattc
acccacgacgcgctcgaccgcgagaccggtgagtacgccgcgaccgtgaccaatcaggcc
ccggcgaaccagcgggccaagtggatctacgacaatagcaacaacgtccccggagtcacc
aacccggtcggccagcccaccaccaccatcgcctatcgggacgggcacgcctataccacc
cagcagaagggcttcaacgtcttcggtaagagcctcggagtcactatcacaatccccgac
gtcgagggcgctctcagcggctcctacgtcttcggacacacctacaacagcgtcctcggg
ctgcccttcaccgacacctacccagccaagggcagcctgccagcggaaaccgtcctgcac
ggctacggcgacctcgacctacctgacagcctcgtcggactcgccgcctacacgcagtac
gtcacctatgacgcgtgggggcgggtcaaccagcagaagatcggctccgcgaccaacttc
gccctggtcaccaacacctacgacacacacaccggccgcctgaccaaccaagtcgtcagc
aaggccaccagcggcaccatcgccacacccctcgacgagcaggaataccgctacgacctg
tacggcaaaatcaaccgcaagatcagtaaacgcaacggcgcctccacccccgccgaaaca
cagtgctacggctacgacggactcaaccggctcaccgaagcctggaccgccaccgacaac
tgcacgaccgcacccacagccggcaaccgcaccatgatcggtaacaccatcggctcaggc
agcgcctactggaccagctgggagattgacgcgatcggtaaccgcaccaagcagatccaa
cgcaacctcactggaggcaacgacacgaccacgacctacacctacaacggcaacggccag
aacaaaccacacacgctcaccgccaccagcgctgtcaccggcgctgccgcctacacttac
gacgccgccggcaatatgaccggacgtaacgctgccgaaggcaaccaaacgctcgactgg
gacgatgcggggaaactcgtctctgtcaccggcggcaccaccggcacgaacaccttcctt
cacgacgctgacggaaacctcctgctccagaaggaacccaccaagaccaccctctacctc
cccggccaacaactcaccctcaacaccaccaccggtgccatcgacggcaaccgctaccac
gccctgcccggcggcggcacctgcatccgctccggcgccagcgccggctacaccttcgcc
ctcgctgaccaccaaggcactccgaccctctacctcgacagcactgcacaagtaccaaca
tggcgccagtacacaccctacggcgcgcctcgcggcattgtcggcacctaccctgacaac
cgcggattcctcaacaaaccgatgagcccgaccggactcaccaccatcggcgcccgcgcg
tacgatcccaccatcggaaggttcatttcggttgatccaatccaggacctgttcgacgcg
cagcagtggaatgggtacagctactcaaacaactccccaattacccgctccgatcccacc
ggtctgatctcagacgaggtcgcggccggccggatgacgcagcgtgaagcgaaggatcac
caggagaagatctgggggcccaagaaggacgattggaaaaagggctccggcggaaagccg
aagaggacctataggtgcgccgaacgcccaggtggctgtgtctctaggccgggttcgccg
ctgtatcagaatcgactaggcgcatgcgtagacgctgccggcactggggtagcctgcccg
tcccggccgtctcctaccccgcaaacgtacgtgcggcccacgccacccaagccaaagaaa
gagtgcaaggcgtgggcttgggtgtgcagtactgggaaatggctcaaagataaccgcaat
gcgatcgtcgccggggccgggatcgtcgctatgggcgcatgcgtcgtcgccaccgcaggc
gtctgtggggctgttgcgggcggcgccgcgcttgttagtatcggataccgggcgtatgat
ctctctcaaaccgacatgggtgccgctgattggggaaagttcgccatcgggacagccaca
gacgtcgccctgacgcgcatcccgactgcgaaggtcccgatacgaggaatgaacaagccc
ttccgtggccacctggacattcccctcggagaagtgggagctaaattgacgggcgcaaca
aaggttcacctgagagccgggcgatacgagcaggcataccgcatcgatccactgagagcg
acgaacgtggtggcaggttgggcgataggcacaaaccacgatccgctcacgaacgcgtac
agtcagattgttgactga
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