Plantactinospora sp. BC1: C6361_30085
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Entry
C6361_30085 CDS
T05377
Name
(GenBank) hypothetical protein
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
plab
Plantactinospora sp. BC1
Brite
KEGG Orthology (KO) [BR:
plab00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
C6361_30085
Enzymes [BR:
plab01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
C6361_30085
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Gene cluster
GFIT
Motif
Pfam:
CBM-like
fn3_3
CarboxypepD_reg
RhgB_N
Rhamnogal_lyase
Motif
Other DBs
NCBI-ProteinID:
AVT32996
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Position
6864228..6866135
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AA seq
635 aa
AA seq
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MLARRDFHRISAATALGAGVGAGTGGTAIGAARGEAPPNCEVVETDTEIVVDNGPVRIAV
SKTSASRLTSLRLHGRELLGAGGRGNYDMNNAMEGDPLPLPPTQNTYEIRRGDDFVDIAF
RYSPTNGGPFWLERHHIVRAGEPGIHLATVFQHPPELHGFRSDQHRYVCYLDPELFTHVS
VEDDPIGQPWRAGAARMPTPAELAAAPVVMDATHDLAGLGSAYPRRYYTKYDWATYLKDH
VVHGLYGNGYGIWAVQPNREAFCGGPVRQDLTLHQTTSRPVLLVEPQATHYGSPPVRVAA
GQAWEKTYGPYFVYLSRGDDPARMRAEALRYASFDAHRDLYDRVALPGWTPSARRCTVHG
RIRLDGEPHLRGAVAVLSDNRLDFQRTALGYAYWTEVNPGGVFRLPDVRPGTYRLTVYRP
GTWGEYVRDDVTVPAGGRIDLGELRWEPPRNGRTVFQLGNPDRTSAEFRRGDEFRQWGTA
RFFKADFPDGVVYTVGRSGNDDWNYLQFQRVDGEPVPPWRIRFDLDRPVRPGATATLTVA
LAAWAMDTARDVPPLPSNLTIGVNDLRLVWTFAPDDARGATYRSACGGRHYRREFRFDAA
ALRRTGNEITLAINEGTPPELGNEAAYDAIRLEID
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgcacgcagggacttccatcggatcagcgccgcgaccgccctcggcgccggggtc
ggcgccggaaccggcggcacggccatcggcgcggcccggggcgaggcgccgccgaactgc
gaggtcgtcgagaccgacaccgagatcgtcgtcgacaacgggccggtccggatcgccgtc
agcaagaccagcgccagccggctgacctcgctgcgactgcacggtcgggagttgctcggc
gccggcggccgaggcaactacgacatgaacaacgcgatggagggcgatccgctgccgctg
ccgccgacgcagaacacgtacgagatccggcgcggggacgacttcgtcgacatcgccttc
cggtacagcccgaccaacggcggcccgttctggctggagcggcaccacatcgtccgggcc
ggcgagcccggcatccacctggccaccgtcttccagcacccgccggagctgcacggcttc
cgctccgaccagcaccggtacgtctgctacctcgacccggaactcttcacccacgtctcc
gtcgaggacgacccgatcgggcagccgtggcgggccggggcagcccggatgcccaccccg
gcggaactggccgccgctcccgtggtgatggacgcgacgcacgacctcgcgggcctcggc
tcggcctatccccggcgctactacaccaagtacgactgggccacctatctcaaggatcac
gtggtgcacggcctctacggcaacgggtacgggatctgggcggtccagccgaaccgggag
gcgttctgtggcgggccggtccggcaggacctgaccctgcaccagaccaccagccggccg
gtgttgctggtcgagccgcaggcgacgcattacggttcgccaccggtacgggtggccgcc
ggccaggcgtgggagaagacgtacgggccgtacttcgtctacctgagccggggcgacgac
ccggcccggatgcgtgccgaggcgctgcggtacgccagcttcgacgcccaccgggacctc
tacgaccgggtggcgctgccgggctggacgccgagcgcgcggcgctgcaccgtgcacggc
cggatccggctcgacggcgagccgcacctgcggggcgcggtggcggtgctctcggacaac
cggctggacttccagcgcaccgcgctcggctacgcgtactggacggaggtgaacccgggc
ggcgtgttccggctgcccgacgtgcggcccgggacgtaccggctcaccgtctaccggccc
ggcacctggggcgagtacgtccgcgacgacgtgacggtgccggccggcggccggatcgac
ctcggcgagctgcgctgggagccgccccgcaacggccggacggtcttccagctcggcaac
ccggaccgcacctcggcggagttccggcgcggcgacgagttccggcagtggggtacggcg
cggttcttcaaggccgacttcccggacggggtggtctacaccgtcgggcgcagcgggaac
gacgactggaactatctccagttccagcgggtcgacggggaaccggtgccgccgtggcgg
atccgcttcgacctcgaccgcccggtgcggccgggcgcgaccgccacgctgaccgtcgcg
ctcgccgcctgggcgatggacaccgcccgggacgtaccgccgctgccgagcaacctgacc
atcggggtgaacgacctgcggctggtctggaccttcgcgccggacgacgcccggggcgcc
acctaccgcagcgcctgcggcggccggcactaccggcgggagttccggttcgacgcggcc
gcgctgcgccggaccggcaacgagatcaccctggcgatcaacgaggggaccccgccggag
ctgggcaacgaggcggcgtacgacgctatccggctggagatcgactga
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