Plantactinospora sp. BC1: C6361_31995
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Entry
C6361_31995 CDS
T05377
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
plab
Plantactinospora sp. BC1
Pathway
plab03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
plab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
C6361_31995
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plab03400
]
C6361_31995
Enzymes [BR:
plab01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
C6361_31995
DNA repair and recombination proteins [BR:
plab03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
C6361_31995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
UvrD_C_2
SH3_13
Viral_helicase1
HHH_5
AAA_11
Helicase_RecD
HHH
NPHP3_N
PhoH
DEAD
UvrD-helicase
TraI_hel_assoc_N
UvrD_C
AAA_22
DAP3
nSTAND3
PIF1
MeaB
Motif
Other DBs
NCBI-ProteinID:
AVT33302
LinkDB
All DBs
Position
7289962..7292244
Genome browser
AA seq
760 aa
AA seq
DB search
MTGQQAPTAVRPASTAGDGPTERPAGVVLEAVLERITYANEETGYTIARFATERSGPDLL
TVVGSLLGLQPGESVRLVGRWGTHPKYGRQFEVQSYTTVLPATVQGIERYLGSGLIKGIG
PKMAERIVGHFGVDTLRVIEEEVGRLVEVPGLGPKRTKLIAAAWVEQQSIKEVMVFLQGV
GVSTSLAVRIYKKYGDGSISVVRNEPYRLAADVWGIGFKTADTIAQAVGIPHDSPQRVRA
GIQYTLSEAADAGHCYLPEPNLVADAAEILGVPVELVRDCLADLAADEGVVREAVPNPSA
EGGTIPAVYLVPFHRAESALAASLLRLLHHRDDRMPAFATVDWAKALAWLRTRTGAELAP
EQEAAVRLALTSKVAVLTGGPGCGKSFTVSSVITLAAAKGAKIVLAAPTGRAAKRMTELT
GHPAATVHRLLQLRPGGDPTHDRDNPIDADLVVVDEASMLDLLLANKLVRAVAPGAHLLL
VGDVDQLPSVGAGEVLRDVLGAGSIPRVRLTKIFRQAQQSGVVVNAHRINAGQSPLLGEY
PDFFLFPVDEPEATADLVVDIVARRVPRKFGLKPRDIQVLTPMHRGPAGAGSLNTALQQA
ISPYREGQPERRHGARVFRVGDKVIQIRNNYDKGAAGVFNGTVGVVTELSVEDRKLTVRT
DEAEEIGYDFDELDELQHAYAITVHRSQGSEYPAVVIPVTMSSYTLLQRNLLYTAVTRAR
KLVVLAGSRKALAIAVRTAGTGRRHTALTHRLGGLDLAVT
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
gtgaccggacagcaggcaccgaccgccgtacggccggcgtcgaccgccggggacggcccc
accgagcggccggccggggtggtgctggaggcggtactggagcggatcacctacgccaac
gaggagaccggctacaccatcgcccggttcgccaccgaacgcagcggccccgacctgctg
accgtggtcggctcgctgctcgggttgcagcccggcgagagcgtacggctggtcgggcgc
tggggcacgcacccgaagtacgggcggcagttcgaggtgcagtcgtacacgacggtgctg
ccggcgacggtccagggcatcgagcggtacctcggctcggggctgatcaaggggatcggg
ccgaagatggccgaacggatcgtcgggcatttcggcgtcgacaccctgcgggtgatcgag
gaggaggtcgggcggctggtcgaggtccccgggctcggcccgaagcggacgaaactcatc
gccgccgcctgggtcgagcaacagtccatcaaggaggtgatggtcttcctccagggcgtc
ggcgtctccacctcgctggccgtacgcatctacaagaagtacggcgacggctccatctcg
gtcgtccgcaacgagccgtaccggttggccgccgacgtctgggggatcggcttcaagacc
gccgacaccatcgcccaagcggtcggcatcccgcacgacagcccgcagcgggtccgggcc
ggcatccagtacaccctctccgaggccgccgacgccgggcactgctacctgcccgagccg
aacctggtcgcggacgccgccgagatcctcggggtccccgtcgaactggtccgggactgc
ctggccgacctcgccgccgacgagggcgtggtccgggaggcggtgccgaacccgagcgcc
gagggcggcaccattccggcggtctacctggtgccgttccaccgggccgagtcggcgctc
gcggcgagcctgctccggctgctgcatcaccgtgacgaccggatgccggccttcgcgacc
gtggactgggcgaaggcgctggcctggctgcgtacccggacgggtgccgaactggccccc
gagcaggaggccgcggtccggctcgccctgacctcgaaggtcgcggtgctgaccggcgga
cccggctgcggcaagtcgttcaccgtctcctcggtgatcacactcgccgccgccaagggg
gcgaagatcgtgctggccgcgccgaccggccgggccgcgaagcggatgaccgaacttacc
gggcatccggccgcgaccgtgcaccggctgctgcaactgcgccccggcggcgacccgacg
cacgaccgggacaacccgatcgacgccgacctggtggtggtggacgaggcgtcgatgctc
gacctgctcctggcgaacaagctggtcagggcggtcgcacccggcgcgcacctgctgctg
gtcggcgacgtcgaccaactcccctcggtcggggccggcgaggtgctccgggacgtgctc
ggcgccgggtcgatcccccgggtccggctgacgaaaatcttccggcaggcgcagcagtcc
ggggtggtggtgaacgcgcaccggatcaacgccggccagtccccgctgctcggcgaatat
cccgacttcttcctctttccggtggacgagccggaggccaccgccgacctggtggtggac
atcgtcgcccgccgggtgccccgcaagttcggcctgaagccccgggacatccaggtgctc
accccgatgcaccggggcccggccggcgccggcagcctgaacaccgcgctgcaacaggcg
atctcgccctatcgggaggggcagccggagcgtcggcacggcgcccgggtcttccgggtc
ggcgacaaggtcatccagatcaggaacaactacgacaagggcgccgccggggtcttcaac
ggcaccgtcggggtggtcaccgaactgtcggtcgaggaccggaaactcaccgtccgcacc
gacgaggccgaggagatcgggtacgacttcgacgaactcgacgagctgcaacacgcgtac
gccatcacggtgcaccggtcccagggcagcgagtacccggcggtggtgatcccggtgacg
atgagttcctacacgttgttgcagcggaacctgctctacacggcggtgacccgggcccgg
aagctggtggtactggccggctcgcgcaaggcgctggcgatcgcggtccgtaccgccggc
accggccgccggcacaccgcactcacccaccggctcggcgggctcgaccttgctgtgacg
tga
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