Plantactinospora sp. BC1: C6361_34605
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Entry
C6361_34605 CDS
T05377
Name
(GenBank) endonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
plab
Plantactinospora sp. BC1
Pathway
plab03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
plab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
C6361_34605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plab03400
]
C6361_34605
Enzymes [BR:
plab01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
C6361_34605
DNA repair and recombination proteins [BR:
plab03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
C6361_34605
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
AVT35055
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All DBs
Position
7893572..7894468
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AA seq
298 aa
AA seq
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MPATDLGTGSGSGPAPSRPVGSHTPTSGGLARAALPYADAIGSEVVQVYVGNSRGWALPP
GDPGQDAAFRAGCAERGLLTYIHASLLVNLGSPTPATVERSVATLAHALDRGAAIGAAGV
VFHAGSAVDAGHAEAAMRQVREALLPLLDSAAASGGPKLLVEPSAGGGRSLASRVEHLAP
YLGAVDWHPWLGACFDTCHAWAAGHDLAREGGMRETLDTLVEVIGADRLWLVHANDSRDL
CGSTRDRHETIGKGSIGESAFAELMTHPATAGIPVVVETPSENHGHADDIATLKRFRP
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atccccgccaccgacctcggcaccggctcgggcagcgggcccgcgccgagccggcccgtc
ggctcgcacacgcccacctccggcgggctggccagggcggccctgccgtacgccgacgcg
atcggctccgaggtggtgcaggtctatgtcggcaactcgcggggctgggcgctgccaccc
ggcgaccccggacaggacgcggcgttccgggccggctgcgccgaacgcgggctgctgacg
tacatccacgcgtcgctgctggtgaacctcggctcgcccaccccggcgaccgtcgagagg
tcggtggcgaccctggcgcacgcgctggaccggggtgccgcgatcggtgccgccggggtg
gtcttccacgccggcagcgcggtcgacgccgggcacgccgaggcggcgatgcgacaggta
cgcgaggcactgctgccgctgctcgactcggcggcggccagcggcgggccgaagctgctg
gtggagccgagcgccggtggcgggcgttcgctggcctcccgggtcgagcacctggcgccc
tacctcggcgccgtcgactggcacccgtggctcggtgcctgcttcgacacctgccacgcc
tgggcggccgggcacgacctggcccgggagggcggcatgcgcgagacgctggacaccctg
gtcgaggtgatcggggcggaccggctgtggctggtccacgccaacgactcgcgggacctc
tgcggctcgacccgggaccggcacgagacgatcggcaagggcagcatcggcgagtccgcc
ttcgccgagctgatgacccatccggcgaccgccggcatcccggtggtggtcgagacgccg
agcgagaaccacgggcacgccgacgacatcgccaccctcaaacgcttccgcccctga
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