Plantactinospora sp. BC1: C6361_35455
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Entry
C6361_35455 CDS
T05377
Name
(GenBank) AraC family transcriptional regulator
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
plab
Plantactinospora sp. BC1
Pathway
plab03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
plab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
C6361_35455
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
plab03000
]
C6361_35455
03400 DNA repair and recombination proteins [BR:
plab03400
]
C6361_35455
Enzymes [BR:
plab01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
C6361_35455
Transcription factors [BR:
plab03000
]
Prokaryotic type
Helix-turn-helix
AraC family
C6361_35455
DNA repair and recombination proteins [BR:
plab03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
C6361_35455
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HhH-GPD
RecR_HhH
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
AVT33860
LinkDB
All DBs
Position
complement(8075513..8077177)
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AA seq
554 aa
AA seq
DB search
MELDFERCYRAVDSRDQRFDGWFYTGVTTTGIYCRPSCPATTPKRHNVRFYPSAAAAQRA
GLRACRRCRPDAAPGSPEWNVRADVVGRAMRLIADGVVDREGVPGLASRLGYTERHLNRM
LVAEVGAGPLALARAQRAQTARILVETTDLGLAEIAFAAGFGSVRQFNDTIREVYAVAPS
ALRDAARRTAGTGSRRASRPLRSADLAAATVRGGPNGNGRTGGPHGNGTTGGPNGNGVPG
TITLRLAYRAPLHADALLDFLALRAVPGIEEVGAGSYRRGLRLPNGPAEIALTPMPGYVA
ATLRLTDVRDLAPAVARCRRLFDLDADPEAVDALLGADPAFAEAVAKEPGIRVPRAVDGF
EMAVRAIVGQQVSVAGARTVLARLAAATTAGTPTTPPRDTLPGTDQAGPEVEPAAGAVGS
PPGPGGSGGLRAFPSAEEVLALPDSAFGMPAARRATIRALAEAVAAGDLDLDPGADRAEL
VDRLTALPGIGPWTAGYVAMRAIGDPDVFLPTDLGVRRGAAALGLPDDPKSLDAYAGRWR
PWRSYAVIRLWRAE
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atggagctggacttcgagcggtgctatcgggcggtcgacagccgggaccagcggttcgac
ggctggttctacaccggcgtcaccaccaccggcatctactgccggccgtcctgcccggcg
acgaccccgaagcggcacaacgtccggttctacccgtcggccgccgccgcccagcgggcc
ggactgcgcgcctgccggcggtgccggccggacgccgcccccggttcgccggagtggaac
gtccgggccgacgtcgtcggccgggcgatgcggctgatcgccgacggcgtggtcgaccgg
gagggggtgccggggctggcgagccggctcggctacaccgagcggcacctgaaccggatg
ctggtcgcggaggtgggcgccgggccgctcgcgctggcccgggcccagcgggcgcagacc
gcccggatcctggtcgagacgaccgacctcggcctggccgagatcgccttcgccgccggt
ttcggcagcgtacggcagttcaacgacacgatccgcgaggtgtacgcggtcgcgccgtcc
gcgctgcgcgacgccgcccgccgcaccgccggtacgggctcccgccgtgcttcccggccg
ctgcgcagcgctgatctggcggccgcgaccgtccggggcggcccgaacggcaacggcaga
acaggcggcccgcacggcaacggcacgacgggcggcccgaacggcaacggcgtaccgggg
acgatcacgctgcggctcgcctaccgggcaccgctgcacgccgacgcgctactggacttc
ctcgccctgcgggcggtgcccgggatcgaggaggtcggcgccgggtcgtaccgccgtggc
ctgcggctgccgaacggaccggccgagatcgccctgaccccgatgcccgggtacgtcgcc
gccaccctccggctcaccgacgtccgcgatttggccccggcggtggcccgctgccgccgg
ctcttcgacctggacgccgacccggaggcggtggacgccctgctcggcgccgatcccgcg
ttcgccgaggcggtggcgaaggagcccggcatccgggtaccccgtgcggtggacggtttc
gagatggccgtccgggcgatcgtcggccagcaggtctcggtcgccggtgcgcgtaccgtg
ctggcccggctcgccgccgcgaccaccgccggcacgccgaccaccccgccccgggacacc
ctgcccggcaccgaccaggccgggccggaggtcgagccggcggcgggggcggtgggcagc
ccgcccggcccgggcgggagcggcgggctgcgcgcgtttccgtccgccgaggaggtgctg
gcgctgcccgactcggcgttcggcatgccggccgcccggcgggcgacgatccgggccctg
gccgaggcggtcgccgccggcgacctggacctggaccccggcgcggaccgggccgagctg
gtcgaccggctgaccgcgctgcccggcatcggcccgtggaccgccggctacgtcgcgatg
cgggcgatcggcgaccccgacgtcttcctccccaccgacctcggggtacgccggggcgcc
gcggcgctcggcctccccgacgacccgaagagcctcgacgcgtacgccggccgctggcgg
ccctggcgctcgtacgcggtgatcagactatggagagcggaatga
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