Paraburkholderia largidicola: PPGU16_00260
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Entry
PPGU16_00260 CDS
T10364
Symbol
topB
Name
(GenBank) DNA topoisomerase III
KO
K03169
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
plad Paraburkholderia largidicola
Brite
KEGG Orthology (KO) [BR:
plad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
plad03032
]
PPGU16_00260 (topB)
Enzymes [BR:
plad01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
PPGU16_00260 (topB)
DNA replication proteins [BR:
plad03032
]
Prokaryotic type
DNA Topoisomerases
PPGU16_00260 (topB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_Crpt
Toprim
HypA
Zn_ribbon_PADR1
HC2
Cas12f1-like_TNB
DnaJ_CXXCXGXG
zf_Rg
Motif
Other DBs
NCBI-ProteinID:
BCF86959
UniProt:
A0A7I8BES3
LinkDB
All DBs
Position
1:complement(28741..31464)
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AA seq
907 aa
AA seq
DB search
MGAKPGLENPWSPPESTNLFSVMSKALIIAEKPSVANDIARALGGFTKHDEYFESDDFVL
SSAVGHLVEIAAPEEYEVKRGKWSFANLPVIPPHFDLHPIAKSESRLKVLNRLIKRKDVD
RLINACDAGREGELIFRLIAQHAKAKQPVQRLWLQSMTPAAIRDGFAQLRSDNDMQPLAD
AARCRSEADWLVGINGTRAMTAFNSKGGGFFLTTVGRVQTPTLSIVVEREEKIRRFIPRD
YWEVKAEFVCAAGFYEGRWYDPKFKKDEFDPEKRDSRLWSLPAAETIVAACRGQTGIVTE
ESKPSTQLSPALFDLTSLQREANGRFGFSAKNTLGLAQALYEKHKVLTYPRTDARALPED
YQETVKHTLEMLKESNNYLPYAKQVLDKGWVKPNKRIFDNSKISDHFAIIPTLQAPKALS
EPEQKLYDLVVKRFLAVFFPAAEFRVTTRITEVVGHHFKTEGKVLVEPGWLQIYGRETAG
EDANLVPVQKGEKVKTDKIAAQQLVTKPPARYNEATLLSAMEGAGKLVEDDELREAMAAK
GLGTPATRAAIIEGLLGEKYLVREGRELIPTAKAFQLMTLLRGLDVKELTAPELTGEWEY
KLSQMERGKLPRDAFMQEIARMTQTIVKRAKEYDSDTIPGDYATLQTPCPNCGGQVKENY
RRFACTKCEFSISKIPGGRQFEIEEVEELLQKKQIGPLSGFRSKMGRPFSAILKLSFDDE
TKNYKLEFDFGQDQGGEDGEAPDFSEQTPVGACPKCGGKVFEHGMSYVCENSVANPKTCD
FRSGKVILQQEIAREQMAKLLEDGRTDLLTNFKSSRTGRNFKAFLVKQSDGKIGFEFEKK
EPKEGAAKKTAAKSAAKASPESANDDAASEAPAKKVATKTAAAKKAPAKKAAAKTSAAKT
AARKTGS
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atgggtgccaaacccgggttggaaaacccgtggtccccgcccgaatccaccaatttattt
tcagtcatgtccaaagcactgatcatcgccgaaaagccatccgtcgcgaacgacatcgcg
cgggctttgggcggttttaccaagcatgacgagtactttgaaagcgacgatttcgtcctt
tcgtcggctgtcggccatctcgtggagatcgctgcgccggaagaatatgaagtcaaacgg
ggaaaatggagtttcgccaatctccccgttattccgccgcatttcgatctgcatcccatt
gcgaaaagcgagtcgcggctgaaagtcctgaaccggctgatcaagcgcaaagacgtcgat
cgcctgatcaacgcatgtgacgcggggcgcgagggcgaactcattttccgcctgatcgcg
cagcacgcaaaagcgaagcagccggtgcagcgcctgtggctgcagtcgatgacgcccgcc
gcgatccgcgacggcttcgcgcaactgcgcagcgacaacgacatgcaaccgctcgcggac
gccgcacgctgccgttcggaagcggactggctggtcggtatcaacggcacgcgcgcgatg
accgcgttcaacagcaagggcggcggcttcttcctgaccaccgtcggccgcgttcagacg
ccgacgctgtcgatcgtggtcgaacgcgaagagaagattcgccgcttcatcccgcgcgac
tattgggaagtgaaggcggaattcgtctgcgcagcgggtttctacgaaggccgctggtac
gacccgaagttcaagaaggacgagttcgatccggaaaagcgcgattcgcgcctctggagc
ctgccggctgccgaaacgatcgtcgctgcctgtcgcggccagacgggcatcgtgacggaa
gagtcgaagccgtcgacgcaactgtcgccggcgctcttcgacctcaccagcctgcagcgc
gaagccaacggacggttcggcttttcggccaagaacacgctcggcctcgcccaggcgctg
tacgaaaagcacaaggtgctgacctatccccgtaccgacgcgcgcgcgctgccggaagac
taccaggagacggtcaagcacacgctggagatgctcaaggagagcaacaactatctgccg
tacgcgaagcaggtgctcgacaagggctgggtgaagccgaacaagcgcatcttcgacaat
tcgaagatcagcgatcacttcgcaatcatcccgacgctgcaggcgccgaaggcgctctcc
gagcccgagcagaagctctacgacctcgtcgtcaagcgcttcctggcggtgttcttcccg
gctgccgagttccgcgtgaccacgcgtatcacggaagtcgtcggccatcatttcaagact
gaaggcaaggtgctcgtcgagccgggctggctgcagatctatggccgcgagacggccggc
gaggatgccaatctcgtccccgttcagaagggcgagaaggtcaagaccgacaagatcgcc
gcgcagcaactcgtgacgaagccgcccgcacgctacaacgaagcaacgctgttgtcggcg
atggaaggcgcgggcaagctcgtcgaagacgacgaactgcgcgaagccatggctgcaaag
ggtctgggtacgccggccacgcgcgccgccatcatcgaaggtctgctcggcgaaaagtat
ctggtccgcgaaggccgcgaactgattccgaccgcaaaggctttccagctgatgacgctg
ctgcgcggcctcgacgtgaaggaactgaccgcgccagaactgacgggcgaatgggaatac
aagctgtcgcagatggaacgcggcaagctgccgcgtgacgcgttcatgcaggaaatcgcc
cgcatgacgcagaccatcgtcaagcgcgcgaaggagtacgactccgacacgattcccggc
gactacgcgacgctgcaaacgccctgccccaactgcggcggccaggtgaaggaaaactac
cggcgcttcgcctgcacgaagtgtgagttctcgatttcgaagattccgggcggccggcag
ttcgagatcgaagaagtcgaagagctgttgcagaagaagcaaatcggtccgctttccggt
ttccgcagcaagatgggccgtccgttttcggcgattctcaagctctcgttcgacgacgaa
acgaagaactacaagctcgagttcgacttcggccaggaccagggcggcgaagacggcgag
gcgccggacttctccgagcaaacgcccgtcggcgcatgtccgaagtgcggcggcaaggtg
ttcgagcacggcatgagctatgtctgcgagaactcggtcgcgaatccgaagacgtgcgac
ttccgttcgggcaaggtgatcctgcagcaagagatcgcgcgcgagcagatggcgaaattg
ctggaggacgggcgcaccgacctgctgacgaacttcaagtcgtcgcgcacgggccgcaac
ttcaaggcgttcctcgtcaagcagagcgacggcaagatcggcttcgagttcgaaaagaag
gagccgaaggaaggcgcagcgaagaagacggccgcgaagtccgcagccaaggcctcgccc
gagtccgcgaacgacgacgccgcgagcgaagctccggcgaagaaggtcgcaacgaagacg
gctgcggccaagaaagcgcccgcaaagaaggcagccgccaagacatcggcagcgaaaacc
gcagcgcgcaagaccggttcgtaa
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