Paraburkholderia largidicola: PPGU16_00430
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Entry
PPGU16_00430 CDS
T10364
Symbol
mrdA
Name
(GenBank) penicillin-binding protein
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
plad Paraburkholderia largidicola
Pathway
plad00550
Peptidoglycan biosynthesis
plad01100
Metabolic pathways
plad01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
plad00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PPGU16_00430 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
PPGU16_00430 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
plad01011
]
PPGU16_00430 (mrdA)
Enzymes [BR:
plad01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
PPGU16_00430 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
plad01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
PPGU16_00430 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
BCF86976
UniProt:
A0A7I8BEG7
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All DBs
Position
1:complement(47422..49824)
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AA seq
800 aa
AA seq
DB search
MTEFKDTQQQLTKFRLRVAAAGLFVFVCFGLIAFRFLFLQVWHYSKYSLQADENRISVAP
IVPNRGIITDRNGVVLAKNYSAYTLEITPSKLNDTLDNVIDNLATVISIDARDRRRFRKL
QEDSKNFESLPIRTRLTDDEVARFTAQRFRFPGVEVRARLFRQYPLGPTAAHVIGYIGRI
SQRDQDKIDDASDQNDSDPEHYDARLDANNYKGTDYIGKIGVEQSYETELHGLTGFEEVE
VTAGGRPVRTLSRTQATPGNNLVLSLDIGLQQVAEQAFAGRRGALVAIEPSTGDVLAFVS
APSFDPNSFVDGIDQQTWDELNNSPDHPLLNRPLHGTYPPGSTYKPFMALAALTLHKRTP
QWGFQDPGSYTFGGHTFRNDVPQGQGWIDMNRAIMVSNDTYFYMLAHDLGVNAIAGFMKP
WGFGQITGIDIAGEARGILPSTDWKHKAYRKPEQQRWYEGETISLGIGQGYNSYTILQLA
HATATLANNGTVMKPHLVKEIENPITRALRATVPKDDGRIDVKQSDIDVVKRGMENVTMN
PSGTAYQVFRNAAYVSAGKTGTAQVFSLQGAKYHGHALAEHLRDHALFIAFAPADNPKIA
IALIVENGGWGAQAAGPIARRVLDYYLVDRLKPGVEQAAVVAAASATEETSAPVIGSAPA
APTGDIQPVAVAAGFKPLPMPAGASTPHAAPPSDASGAVAASGAASASAPVAASAAAPRA
ASASKPAKAPRVASATVAQPPAASDATATTAAAPVKASDARKSPRKPRPASDARPVAAAP
SRNEDSQAVPRGPVSGGIDE
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaattcaaggacacccagcagcagctcacgaaattccgcctgcgcgtcgcggcg
gcggggctgttcgtgttcgtctgcttcgggctgatcgcgttccgcttcctgttcctgcag
gtctggcactacagcaagtattcgctgcaggccgatgaaaaccgcatctcggtcgcgccg
atcgtgccgaaccgcggcatcatcaccgaccgcaacggcgtcgtgctggccaagaactac
tcggcctacacgctcgaaatcacgccgtcgaagctgaacgacacgctcgacaacgtgatc
gacaatctcgcgaccgtcatcagtatcgacgcgcgcgatcgtcgccgtttccgcaagctg
caggaagactcgaagaacttcgaaagcctgccgatccgcacacgactcaccgacgacgaa
gtcgcgcgcttcaccgcgcagcgtttccgcttcccgggcgtcgaagtgcgcgcgcgcctg
ttccgccaatatccgctcggaccgacggcggcgcacgtgatcggctatatcgggcgcatt
tcgcagcgcgaccaggacaagatcgacgacgccagcgatcagaacgacagcgatcccgag
cactacgatgcgcgcctcgacgcgaacaactacaagggcaccgactacatcggcaagatc
ggcgtcgagcagagctacgagacggaactgcacggtctgacgggcttcgaggaagtcgaa
gtgacggcaggcggacgcccggtgcgcacgctgtcgcgcacgcaggcgacgccgggcaac
aacctcgtgctgtcgctcgatattggtttgcagcaggtcgccgagcaggcattcgccggc
cgccgcggcgcgctcgtcgcgatcgaaccgtcgacaggcgacgtgctcgcgttcgtgtcc
gcaccgagcttcgatccgaattcgtttgtcgacggcatcgaccagcagacgtgggacgaa
ttgaacaactcgcccgatcacccgctgctgaaccgtccgctgcacggcacgtatccgccc
ggctcgacgtacaagccgttcatggcgctcgccgcgctgaccctgcataagcgcacgccg
cagtggggcttccaggatccgggctcgtacacgttcggcggccacacgttccgcaacgac
gtgccgcagggtcagggctggatcgacatgaaccgcgcgatcatggtgtcgaacgacacc
tacttctacatgctcgcgcacgatctcggcgtcaacgcgatcgccggcttcatgaaaccg
tggggcttcggccagattacgggcatcgatatcgccggcgaagcgcgcggcatcctgccc
tcgacggactggaagcacaaggcgtatcgcaagcccgagcagcaacgctggtacgaaggc
gagacgatcagcctcggcatcggccagggttacaactcgtacacgattcttcagctcgca
cacgcgacggcgacactcgcgaacaacggcacggtgatgaagccgcaccttgtgaaggag
atcgagaatccgatcacccgggcattgcgcgcaaccgtgccgaaggacgacggacgcatc
gacgtgaagcagtccgatatcgacgtcgtgaagcgcggcatggaaaacgtgacgatgaac
ccgtcgggcactgcgtatcaggtgttccgcaatgccgcgtatgtgtcggcgggcaagacg
gggacggcgcaggtgttctcgctgcaaggcgcgaagtaccacggccacgcgctcgctgaa
catctgcgcgaccacgcgctcttcattgcgttcgcccccgccgacaacccgaaaatcgcg
atcgcgctgatcgtcgaaaacggcggctggggcgcgcaagccgcgggcccgatcgcacgg
cgcgtgctcgactattacctcgtcgaccgactgaagccgggcgtcgagcaggcagccgtc
gtggcggccgcgtcggcgacggaagaaacgtcggcgcccgtcatcggcagcgcgccggcg
gcgcctaccggcgacattcagcctgtcgccgtcgcggccggcttcaagccgctgccgatg
ccagcgggcgcatcaacgccgcatgcggcgcctccatcggatgcatctggcgctgtcgcg
gcgtcgggcgcagcctcggcttcggcgcctgtcgctgcgtcagccgcagcgccgcgagcc
gcttcggcgtcgaagccggccaaggcgccgcgcgtcgcgtcggccacggtcgcgcagcca
cccgctgcatctgacgcgacagccaccacggctgcggcacccgtcaaggcgtccgacgcc
cgcaagtccccacgaaaaccccgtccggccagcgatgcgcggccggtcgccgccgcgccg
tcgcgcaacgaggactcgcaggccgtgccgcgtggtcccgtttccggcggcatcgacgag
taa
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