Paraburkholderia largidicola: PPGU16_00700
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Entry
PPGU16_00700 CDS
T10364
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
plad Paraburkholderia largidicola
Pathway
plad00300
Lysine biosynthesis
plad00470
D-Amino acid metabolism
plad01100
Metabolic pathways
plad01110
Biosynthesis of secondary metabolites
plad01120
Microbial metabolism in diverse environments
plad01230
Biosynthesis of amino acids
Module
plad_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
plad00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PPGU16_00700 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PPGU16_00700 (dapF)
Enzymes [BR:
plad01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
PPGU16_00700 (dapF)
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
CitF
Hexokinase_2
Motif
Other DBs
NCBI-ProteinID:
BCF87003
UniProt:
A0A7I8BF00
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Position
1:complement(77450..78310)
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AA seq
286 aa
AA seq
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MKLKFTKMHGAGNDFVVLDGYTQPLNLTEAQVRALANRHFGVGADQLLVVEKPTVEGVDF
RYRIFNCDGGEVEHCGNGARCFVKFVRDTHLTDKQSVRVQVQKGVITLTMQANGEVVVDM
GTPVFEPAQVPFDASGLDARREGNDALYPLDVNGATRWISVVSMGNPHAVQIVDDVEAFP
VLVDGPVIENHPRFPQRVNAGFMQIVSRSEIKLRVYERGAGETLACGTGACAAVAAGIRR
GLLDAPVKVHTHGGALTITWNGESASPLMMAGPAATVFEGEIELAD
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgaaattcaccaagatgcacggcgcgggcaacgacttcgtcgtgctcgacggc
tacacgcaaccgctcaacctgacggaggcgcaggtgcgcgcgctcgccaaccggcatttc
ggcgtcggcgcggaccagttgctggtggtcgagaagccgaccgtcgaaggcgtcgatttc
agataccgaatcttcaattgcgatggcggcgaggtcgagcattgcggcaacggcgcgcga
tgcttcgttaagttcgtgcgcgacacgcacctcaccgacaagcagagcgtgcgtgtgcag
gtccagaaaggcgtgattacgctgaccatgcaggcaaacggcgaagtcgtcgtcgacatg
ggcacgcccgtgttcgagccggctcaggtgccgttcgacgcaagcggactcgatgcgcgc
cgcgaaggcaacgacgcgctctatccgctcgacgtcaacggcgcgacgcgctggatatct
gtggtgtcgatgggcaatccgcacgcggtgcagatcgtggacgacgtcgaggcgttcccc
gtgctggtcgacggtcccgtgatcgaaaaccatccgcgcttcccgcagcgggtcaatgcg
gggttcatgcagatcgtcagccgcagcgagatcaagctgcgcgtgtacgagcgcggtgcg
ggcgaaacgctggcgtgcggcacgggcgcctgcgcggccgtcgcggcaggcatccgtcgc
ggcttgctggacgcgcccgtcaaggtgcacacgcacggcggcgcgctgaccatcacgtgg
aacggagaatccgcgtcgccgctgatgatggcggggccggccgccactgtgttcgaaggc
gaaatagaactggccgactga
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