Paraburkholderia largidicola: PPGU16_03740
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Entry
PPGU16_03740 CDS
T10364
Symbol
ssb_1
Name
(GenBank) single-stranded DNA-binding protein
KO
K03111
single-strand DNA-binding protein
Organism
plad Paraburkholderia largidicola
Pathway
plad03030
DNA replication
plad03430
Mismatch repair
plad03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
plad00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PPGU16_03740 (ssb_1)
03430 Mismatch repair
PPGU16_03740 (ssb_1)
03440 Homologous recombination
PPGU16_03740 (ssb_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
plad03032
]
PPGU16_03740 (ssb_1)
03400 DNA repair and recombination proteins [BR:
plad03400
]
PPGU16_03740 (ssb_1)
03029 Mitochondrial biogenesis [BR:
plad03029
]
PPGU16_03740 (ssb_1)
DNA replication proteins [BR:
plad03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
PPGU16_03740 (ssb_1)
DNA repair and recombination proteins [BR:
plad03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
PPGU16_03740 (ssb_1)
TLS (translesion DNA synthesis) factors
Other SOS response factors
PPGU16_03740 (ssb_1)
Mitochondrial biogenesis [BR:
plad03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Other Mitochondrial DNA replication factors
PPGU16_03740 (ssb_1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SSB
OSB_SSB
YorF
tRNA_anti-codon
DUF3127
Motif
Other DBs
NCBI-ProteinID:
BCF87307
UniProt:
A0A7I8BFJ2
LinkDB
All DBs
Position
1:421832..422371
Genome browser
AA seq
179 aa
AA seq
DB search
MASVNKVILVGNLGADPEVRYLPSGDAVANIRLATTDRYKDKQSGEFKEMTEWHRISFFG
RLAEIVSEYLKKGSSVYIEGRIRTRKYQAQDGTDRYSTEIVADQMQMLGGRSGAGGGGGG
DDGGYSRGESMERGGGGGGRMSGGGGGAGRVSGGGGGGQSRPSAPAGGGFDEMDDDIPF
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
atggcatccgtgaacaaggtcattctcgtcggcaatctgggtgccgatccggaagtccgt
tatcttccgagcggcgacgcagtggcgaacatccgccttgcaacgaccgaccgctacaag
gacaaacagtcgggcgaattcaaggaaatgacggaatggcaccgcatttcgttcttcggg
cgcctggctgagatcgtgtcggagtacctgaagaagggctcgtcggtgtacatcgaaggc
cgtatccgcacgcgcaagtatcaggcgcaggacggcacggaccgttactcgacggaaatc
gtcgctgaccagatgcagatgctcggcggccgcagtggcgcgggcggcggcggtggtggc
gatgacggcggctatagccgtggcgaatcgatggagcgcggcggtggcggcggtggccgc
atgtcgggcggtggcggtggtgctggccgcgtgtcgggcggcggtggcggcggtcagagc
cgtccgagcgcgccggccggcggcgggttcgatgagatggatgacgatattccgttctaa
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integrated database retrieval system
