Paraburkholderia largidicola: PPGU16_08490
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Entry
PPGU16_08490 CDS
T10364
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
plad Paraburkholderia largidicola
Pathway
plad03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
plad00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
PPGU16_08490 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plad03019
]
PPGU16_08490 (orn)
03009 Ribosome biogenesis [BR:
plad03009
]
PPGU16_08490 (orn)
Messenger RNA biogenesis [BR:
plad03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
PPGU16_08490 (orn)
Ribosome biogenesis [BR:
plad03009
]
Eukaryotic type
Pre-60S particles
RNases
PPGU16_08490 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
BCF87782
UniProt:
A0A7I8BGL7
LinkDB
All DBs
Position
1:962927..963559
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AA seq
210 aa
AA seq
DB search
MTDIIESVDQPLVRSDMNLVWLDMEMTGLDPDNDRIIEIAVVVTNSTLERLVEGPVLAIH
QSDETLGKMDDWNKNTHGRSGLIDRVRASTVTEADATEQIRAFLGQHVPPGKSPMCGNSI
CQDRRFMARWMPELETFFHYRNLDVSTLKELCRRWQPAIYKGFQKRAMHTALADIHESID
ELRYYREHFLIPAASASNAADAPSGDASTK
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
atgactgacattatcgaatccgtcgatcagccgctcgtgcgcagcgacatgaatctcgtc
tggctggacatggaaatgacggggctcgatcccgacaacgaccggatcatcgaaatcgcc
gttgtcgtgacgaattcgacgctcgaaaggctggtcgaaggccccgtgctcgccatccac
cagagcgacgaaacgctcggcaagatggacgactggaacaagaacacgcatggccgttcg
gggctgatcgaccgcgtgcgcgcgtcgacggtgacggaagccgacgccaccgagcagatc
cgcgcgttcctcggccagcacgtgccgcccggcaagtcgccgatgtgcggcaactcgatc
tgccaggaccgccgtttcatggcgcgctggatgcccgaactggaaacgttcttccattac
cgcaacctcgacgtcagcacgctgaaggaactgtgccgccgctggcagcccgcgatctac
aagggcttccagaagcgcgcgatgcataccgcactcgccgatatccatgaatcgatcgat
gaactgcgctactaccgcgagcatttcctgatcccggccgcgagcgcctcgaacgcggcc
gacgcgccgtccggcgacgccagcacgaaataa
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