Paraburkholderia largidicola: PPGU16_08940
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Entry
PPGU16_08940 CDS
T10364
Symbol
rluC
Name
(GenBank) pseudouridine synthase
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
plad Paraburkholderia largidicola
Brite
KEGG Orthology (KO) [BR:
plad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
plad03009
]
PPGU16_08940 (rluC)
Enzymes [BR:
plad01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
PPGU16_08940 (rluC)
Ribosome biogenesis [BR:
plad03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
PPGU16_08940 (rluC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
BCF87827
UniProt:
A0A7I8BGU0
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All DBs
Position
1:1015774..1016826
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AA seq
350 aa
AA seq
DB search
MKELGKISQKSVTSPVASDQVSMIEIDDSAAGQRIDNFLLRVCKGVPKSHIYRILRSGEV
RVNKGRVDAQYRLAFGDLVRVPPIRVAKADEAVHAPVPSAHFEILFEDEHMLVIDKPAGV
AVHGGSGVAFGVIEQLRAARPQAKFLELVHRLDRETSGVLMLAKKRAALVNLHEQIRENR
MDKRYYACVHGEWASDWGRRRAVKEPLHKYLLPDGERRVRVQPDGLPSHTIFNLIDRWPG
YALLEAELKTGRTHQIRVHLAHLGLPIVGDAKYGDFALNKALARANAQPGLKRMFLHAYR
LKLTHPATGDTIQFEAPLPADCKRFIAQLAGMANAGTPHEPSQTETKTHG
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgaaagagttaggcaaaatatcccagaaatcggtgacgagccccgttgcaagcgatcag
gtgtcgatgatcgaaatcgacgacagcgcggccggtcagcggatcgacaacttcctgttg
cgcgtctgtaagggcgtgccgaaaagtcatatttatcggattctgcgcagcggcgaagtg
cgtgtgaacaagggccgggtggacgcgcagtaccgtctcgccttcggcgatctggtgcgc
gtgccgcccattcgggtcgccaaggcggacgaggcggtgcacgcgcccgtaccctccgcg
catttcgagatcctgttcgaagacgagcacatgctcgtgatcgacaagccggccggcgtc
gccgtgcatggcggcagcggggtcgcgttcggcgtgatcgaacagttgcgggcggcgcgt
ccccaggcgaagtttctggaactggtgcaccggctggatcgcgagacgtcgggcgtgctg
atgctcgcgaaaaagcgcgcggcgctcgtgaatctgcacgagcagatccgcgaaaaccgg
atggacaagcgctattacgcgtgcgtgcacggcgaatgggcgagcgactggggccgccgg
cgtgccgtgaaggagccgctgcacaaatatctgctgccggacggcgagcggcgtgtgcgc
gtgcagccggacgggttgccatcgcacactattttcaatctcatcgaccgctggcccggt
tacgcgttgctcgaagcggaactgaaaacggggcggacccatcagattcgtgttcatctg
gcgcatctggggttgccgatcgttggcgacgccaaatacggcgatttcgcgctgaacaag
gcgctggctcgcgcgaacgcgcagccggggctcaaacggatgttcttgcacgcataccgg
cttaagctgacgcacccggcaacgggcgacacgatacagttcgaggcgccactgccggca
gactgcaagcggttcattgcgcaacttgccgggatggcgaacgccggaacgccgcacgaa
ccatcacaaaccgagacgaaaacgcatggctag
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