KEGG   Paraburkholderia largidicola: PPGU16_12860
Entry
PPGU16_12860      CDS       T10364                                 
Symbol
rnhB
Name
(GenBank) ribonuclease HII
  KO
K03470  ribonuclease HII [EC:3.1.26.4]
Organism
plad  Paraburkholderia largidicola
Pathway
plad03030  DNA replication
Brite
KEGG Orthology (KO) [BR:plad00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    PPGU16_12860 (rnhB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:plad03032]
    PPGU16_12860 (rnhB)
Enzymes [BR:plad01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.4  ribonuclease H
     PPGU16_12860 (rnhB)
DNA replication proteins [BR:plad03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    RNase H
     PPGU16_12860 (rnhB)
   Elongation factors (archaeal)
     PPGU16_12860 (rnhB)
SSDB
Motif
Pfam: RNase_HII ssDNA_TraI_N
Other DBs
NCBI-ProteinID: BCF88219
UniProt: A0A7I8BIM3
LinkDB
Position
1:1478203..1478940
AA seq 245 aa
MTSAASRRKASAKKAEQGGLDFSSPEDIVCGVDEAGRGPLAGPVVAAAVILDPSKPRIRG
LDDSKALTAKKRDELYEKIIDRSLAYCVASASVEEIDALNILHATMLAMKRAVEGLKVSP
TLAKIDGNRCPTLSIRSEAIISGDALVPCISAASILAKVTRDRMLLELHQMFPVYGFDAH
AGYGTPQHLTALREHGPCEHHRRSFAPVREAHLRLGTGTRLPEGVIVVPPAAADDAFLAD
DSAPF
NT seq 738 nt   +upstreamnt  +downstreamnt
atgacttcggctgcgtcgcgccgcaaggcgtccgcgaagaaagcggagcagggcggcctc
gatttctcgtcgccggaagatatcgtctgtggcgtcgacgaagcggggcgcggtccgctg
gccgggcccgtagtggccgccgccgtgattctcgatccgtcgaagccgcgcattcgcggc
ctcgacgattcgaaagccctgacggccaaaaagcgcgacgaactctacgagaagatcatc
gaccgttcgctcgcatattgcgtcgcgtcggcttccgtcgaggaaatcgacgcgctgaat
atcctgcacgcgacgatgctcgccatgaagcgcgcagtcgaagggctgaaggtctcgccg
acgctggcgaaaatcgacggtaatcgttgtccgacgctgagcattcgcagcgaggcgatc
atcagcggcgacgcgctcgtgccgtgcatttcggccgcgtcgattctcgcaaaagtcacg
cgcgaccggatgctgctcgaactgcatcagatgttccccgtatatggtttcgacgcgcac
gccggctacggcacgccacagcatctgacggcgctgcgcgagcatggtccgtgcgagcat
caccgacgctcgttcgcgcccgtgcgtgaggcgcatctacggctcggcacgggtacccgt
ctgccggaaggcgtgatcgtcgtgccgcccgcagccgccgacgatgccttcctcgccgac
gacagcgcgccgttctga

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