Paraburkholderia largidicola: PPGU16_16180
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Entry
PPGU16_16180 CDS
T10364
Symbol
pglA
Name
(GenBank) polygalacturonase
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
plad Paraburkholderia largidicola
Pathway
plad00040
Pentose and glucuronate interconversions
plad01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
plad00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
PPGU16_16180 (pglA)
Enzymes [BR:
plad01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
PPGU16_16180 (pglA)
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Motif
Other DBs
NCBI-ProteinID:
BCF88551
UniProt:
A0A7I8BK46
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Position
1:complement(1861457..1863406)
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AA seq
649 aa
AA seq
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MDTRIIEHLASTLTRAARTASVWIASLSTALLLAACGGGSGVAASDVAGGNVNNNGAVAP
AAASSASDASATTPDQPASGATPASDPGGQPTPGFQVGTTTFDAALPPEPTLPTSTQICQ
SLDAALTAQPNGLLPDSADAANTAPDTARIQAALTACTNAASTGLSTNKVVRLRSGANGA
NAFLSGPLNLPSGVTLWIDERVTLFASRDPRQFDKTPGTASCGLITASDNGCNALMTAAK
TSNSAVVGDGTIDGRGGSQLVSSVRDDPNLLKRADGSAMSWWDIGYEANVVQNKSQNNPR
LIQINNGSNFTLYRVTLQNAPKFHVVPSGVQGFTAWGVKIYTPTAAYEAMNNYKGVPYST
VNAKNTDGIDPASSGQITSNPGNPGKLTGDASNMLIAYTSIRTGDDNMAIKGGTAAVNGR
TYNITVAHSHFYEGHGMSIGSESAGSDNGVANADVTPVGGVYPSVSNVNVYDLTIDGADN
GLRIKSDWSRGGLVSNIRYSNVCIRTGNQTSDPEALIFSPYYSPTKSLGLYPNLQSIVLD
GIRIVNASKYTFQGFNSASPVLLGSGWSAGTIGFPTPPVVNPLLISLNNVVADVAPLNMT
VADAQFSIGEGGTTLPLQPGSGVTLMRAAGSQVSPVDCSKAFVPFPAKS
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atggacacccgtatcatcgagcatcttgcatcgacgttgacacgagccgcacggacggcc
tcggtgtggatcgcgtcgctttcgacggcgctgcttctcgcggcctgcggcggcgggtcg
ggggtggcagcgtcggacgtagcgggcggcaacgtgaacaacaacggagcggttgcgccc
gctgcggcttccagcgcaagcgacgccagcgcgaccacacccgatcagcctgcctcaggc
gccacgccagccagcgacccaggcggccagcccacgccaggcttccaggttggcacgacg
accttcgacgccgcgctgccgcccgaaccaaccctaccgacgtccacgcaaatctgtcag
tcgctggacgcggcactgacggcgcaaccgaatggcctgctgcccgatagcgccgacgca
gccaacacggcccccgacaccgcacgcatccaggccgcgctgacggcatgcacgaacgcc
gcgagcacaggcctttcgacaaacaaagtggtgcgtctgcggtctggcgcgaacggggcg
aacgcgttcctgtccggcccgctgaatctgccgagcggcgtcacgttatggatcgacgaa
cgcgtgaccttgttcgcatcgcgcgatccgcgccagttcgacaagaccccaggcacggcg
agctgcggcctgatcactgccagcgacaacggctgcaacgcgctgatgacagccgccaaa
acgagcaacagcgcggtcgttggcgatggcacgatcgacgggcgcggtgggagccagctc
gtcagcagcgtgcgcgacgatccgaatctgctcaagcgcgccgacggctccgcgatgagc
tggtgggacatcggctatgaggcgaacgtcgtgcagaacaagtcgcagaacaacccgcgt
ctcatccagatcaacaatggcagcaatttcacgctgtatcgcgtgacgttgcagaacgcg
ccgaagtttcacgtcgtgccgagcggcgtgcagggcttcactgcatggggcgtcaagatc
tacacgccgacggccgcctacgaggcgatgaacaactacaaaggcgtgccctacagcacg
gtcaacgcgaagaacaccgacggcatcgacccggcgagttccggtcagatcaccagcaat
ccgggcaacccaggcaagctgacgggcgacgcgagcaacatgctgatcgcgtacacatcg
atccgcacaggcgacgacaacatggcgatcaaaggcggcactgcggccgtcaacggtcgc
acgtacaacatcacggtcgcgcacagccacttttacgaaggacatgggatgtcgatcggc
agcgagtcggcggggtcggacaacggtgtggccaatgcagacgtgacgcccgttggcggc
gtgtatccgagcgtgagcaacgtgaacgtctatgacctgaccatcgacggcgccgacaac
ggtttgcgcatcaagtccgactggagccgcggcggcctcgtctcgaacatccgttattcg
aatgtgtgcattcgcacgggcaaccagacgtcggacccggaggcgctgattttctcgccg
tactacagtcccacgaaaagcctcgggctgtatccgaacctccaaagtatcgtgctcgac
ggcatacgcatcgtgaacgcatcgaagtacacgttccagggcttcaattcggcgagtccc
gttctgcttgggtcgggctggtcggcgggaacgattggattcccgacaccgcccgtggtc
aatcccttgctgatctcgctgaacaacgtggttgcggatgtggcgccgctgaatatgacc
gttgcggacgcacaattctcgattggcgaaggcggcacgacgttgccgttgcagcccggc
agcggcgtgacgttgatgcgcgcggcgggctcgcaagtgtcgcccgtcgattgcagcaag
gcgttcgtgccgttcccggcgaagtcctga
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