Paraburkholderia largidicola: PPGU16_19400
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Entry
PPGU16_19400 CDS
T10364
Name
(GenBank) pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
plad Paraburkholderia largidicola
Brite
Enzymes [BR:
plad01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
PPGU16_19400
Ribosome biogenesis [BR:
plad03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
PPGU16_19400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
BCF88873
UniProt:
A0A7I8BKA4
LinkDB
All DBs
Position
1:complement(2204967..2206778)
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AA seq
603 aa
AA seq
DB search
MTDIHDTDSSESERAVAAARPDETRTAQTSAGDSERGAHAPDAEGDERPRRGLRRGPRSL
IARRRAGTKAKAADAAAQPAPVVTEAPPDGEVVAQVRMPRKDAAAKGQGQGGRRAGGKQG
GQQAPRQGNQGSQRKSRGGEAGDVAPVAAAEGDKQDDLFAWVTSPAFDADNTGTGGVRAP
MLRRGRPAAPKRVLSPDDDAPKLHKVLAEAGMGSRREMEELIVAGRVSVNGEPAHIGQRI
MPTDLVRINGKPVKRKLQNKPPRVLLYHKPTGEIVSHADPEGRPSVFDKLPPMKTAKWLA
VGRLDFNTEGLLMLTTSGDLANRFMHPRYSVEREYAVRVVGELAEGNRQKLLHGVELDDG
PANFLRIRDGGGEGTNHWYHVALAEGRNREVRRMFEAVGLMVSRLIRTRHGPITLPRGLK
RGRWEELEDNQVRSLLASVGLKAPAEEKGGGRRGEPERRQPDPMQTSMGFINREPVLMSH
GRFDQQQPRGGGQNRRGGKGAGAFGALNSGAGGGFGNANPNRGEGRGRPGPGRGDVDGNR
APSGNRAAAGANAKRGGSGGGRTPNGAPGGNRSNGGGNRTGGNPNAGGGNRSGGAPRNRS
RGR
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
ttgacagacatccacgacaccgattcgtccgaatccgagcgcgccgtcgctgctgcgcgc
cccgacgaaacgcgcacggcgcaaacgtccgcgggcgatagcgaacgcggcgcgcacgcg
ccggacgccgaaggcgacgagcgtccgcgccgcggcctgcgacgcggtccgcgcagcctg
atcgcgcgtcgccgcgcggggacgaaggcgaaggcggccgacgccgccgcgcaaccggcg
cccgtcgtgacggaagcaccgcccgacggcgaagtcgtcgcgcaagtgcggatgccgcgc
aaggacgcggccgcaaagggacaaggccagggcggtcgccgcgcgggcggcaagcagggc
ggccagcaagctccgcggcaaggtaatcagggcagtcagcgcaagagccgtggcggcgaa
gcgggtgacgtggcgcctgtggcagccgcagaaggcgacaagcaggacgatctgttcgcc
tgggtgacgtcgccggccttcgatgccgacaacacgggaacaggcggcgtgcgtgcgccg
atgctgcgccgtggccggcctgccgcgcccaagcgcgtgctgtcgccggacgacgatgct
cccaagctgcacaaggtgctcgccgaggcgggcatgggctcgcgccgcgagatggaagag
ctgatcgtcgccggccgcgtgtcggtcaacggcgagccggcgcacataggccagcgcatc
atgccgaccgatctggtgcgcatcaacggcaagcccgtcaagcgcaagctgcagaacaag
ccgccgcgcgtgctgctgtatcacaagccgacgggcgaaatcgtcagccatgctgatccg
gaaggccgtccgtcggtattcgacaagctgccgccgatgaagacggcgaagtggctcgct
gtcggccgcctcgacttcaacacggaaggcctgttgatgctgaccacgtcgggcgatctg
gcgaaccgcttcatgcatccgcgttacagcgtcgagcgtgaatatgcggtacgcgtggtt
ggcgaactggcggaaggcaatcggcagaagctgttgcacggcgtcgagctggacgatggt
cctgcgaacttcctgcggattcgcgatggcggcggcgagggtacgaatcactggtatcac
gtcgcgctcgccgaagggcgcaaccgcgaagtgcgccggatgttcgaagccgtcggcctg
atggtgagccggctgatccgcacgcgtcacggtccgatcacgttgccacgcggcctgaag
cgcggacgctgggaagagctcgaggacaatcaggtgcgcagcctgctggcgtcggtgggc
ctgaaggcgcccgccgaagagaagggcggcggacgtcgcggcgagccggagcgtcgtcag
cctgatccgatgcagacgtcgatgggcttcatcaaccgcgagccggtgctgatgtcgcac
ggacgtttcgatcagcagcagcctcgcgggggcggccagaaccggcgcggtggtaagggc
gcgggcgcattcggtgcgttgaattctggcgctggcggcggcttcggcaatgcgaacccc
aatcgcggcgaagggcgtggccgtcctggtcctggtcgcggcgacgtcgacggcaatcgc
gcgccttcgggcaaccgcgcggccgcgggcgccaatgcgaagcgcggcggcagcggcggt
ggccgtacgccgaacggcgcgccgggtggcaaccgttcgaatggcggcggcaatcgcacg
ggcggtaatccgaacgccggcggcggcaatcgcagcggcggcgcgccgcgcaaccggtcg
cgcggacgctga
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