Paraburkholderia largidicola: PPGU16_26330
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Entry
PPGU16_26330 CDS
T10364
Symbol
pcnB
Name
(GenBank) poly(A) polymerase I
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
plad Paraburkholderia largidicola
Pathway
plad03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
plad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PPGU16_26330 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plad03019
]
PPGU16_26330 (pcnB)
Enzymes [BR:
plad01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
PPGU16_26330 (pcnB)
Messenger RNA biogenesis [BR:
plad03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
PPGU16_26330 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
BCF89566
UniProt:
A0A7I8BLC3
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All DBs
Position
1:3018744..3020366
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AA seq
540 aa
AA seq
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MIKKLIRKLFGQDAEPADEAAPPAEADDYAVPEERAHTSRAPRTSSKGGAASSKGGTRRK
PAAAAVSEPDAPVIISSDIHGIDPSLISRNAIRVTEGLQQAGFRAFIVGGAVRDLLLGIA
PKDFDVATDATPEQVQKLFRRARIIGRRFQIVHVQFGQEIIETSTFRALVDAPPADADAP
PPRRLKRDELDRRTHAVDASGRVLRDNVWGEQHEDATRRDFTINAMYYDPATQTVLDYHN
GMADVRARLLRMIGDPATRYREDPVRMLRVVRFAAKLDFDIEEATRAPITELADLINNVP
AARLFDEMLKLLLSGHALACLQRLRKEGLHHGLLPLLDVVLEQPHGEKFITLALNNTDSR
VRAGKPVSPGFLFATLLWHDMQQRWQQYEANGEFPVPALHRAMDDVLDMQTEKLAIHKRF
SSDMREIWGLQHRLEKRSGRSALKLLEHQRFRAGYDFLLLRCESGELDEAVGSWWTEFIE
GDIAAREALLSQGGKDRAPRKRRRRSNSRNRSKQGDGMEGGTASGNRAADDASHDGPHED
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
gtgatcaagaaactcattcgcaagctgttcggacaggacgcagagcccgctgacgaagcc
gcgccgcccgcagaagccgacgactacgctgtgccggaagaacgcgcgcacaccagccgc
gcaccccgtacgtcatcgaaaggcggcgctgcgtcgtcgaagggcggcacgcgccgcaag
ccggccgcagcagccgtgtccgagcccgacgcgcccgtcatcatctcgtcggacattcac
ggcatcgacccttcgctgatttcgcgcaacgcgatccgcgtgacggaagggctgcaacag
gccggctttcgcgcgttcatcgtcggcggcgccgtgcgcgatctgctgctcggcatcgcg
ccgaaggacttcgacgtcgccacggacgccacgcccgaacaggtgcagaagctgttccgc
cgcgcgcgcatcatcgggcggcgcttccagatcgtgcacgtgcagttcggccaggaaatc
atcgaaacgtcgacgttccgcgccttggtcgacgcgccgcccgccgatgccgacgccccg
ccgccgcgccgcctgaagcgcgacgaactggaccgtcgcacgcatgccgtcgatgcaagc
ggccgcgtgctgcgcgacaacgtctggggcgagcagcacgaagacgccacgcgccgcgac
ttcacgatcaacgcgatgtactacgatcccgcgacgcaaaccgtgctcgactatcacaac
ggcatggccgatgtgcgcgcgcgcctgctgcgcatgatcggcgatccggccacgcgctat
cgcgaagacccggtgcgcatgctgcgcgtcgtgcgctttgccgcgaagctcgatttcgat
atcgaagaagcgacgcgcgcgcccatcaccgaactcgccgatctgatcaacaacgtgccc
gccgcgcgtctgttcgacgagatgctcaagctgctgctgtcgggccatgcgctcgcgtgc
ctgcaacgtctgcgcaaggaaggcttgcatcacggtctcttgccgctgctcgacgtcgtg
ctcgaacagccgcatggcgagaagttcatcacgctcgcactgaacaacactgactctcgc
gttcgcgcgggcaagccggtgtcgccgggcttcctgttcgccacgctgctgtggcatgac
atgcagcaacgctggcagcagtacgaggcgaacggcgagttccccgtgcccgcgctgcat
cgcgcgatggacgacgtgctcgacatgcagaccgagaagctggccattcacaaacgcttc
tcgtcggatatgcgcgagatctggggcctgcagcatcgcctcgaaaaacgctcgggccgc
agcgcgctgaagttgctggaacaccaaagatttagagcggggtatgatttcctcctgttg
cgctgcgaatcgggcgaactggatgaagcggtcggttcgtggtggacggagttcatcgaa
ggagacatcgccgcgcgcgaagcattgctttcgcaaggcgggaaggaccgggcgcccaga
aaacgacggcggcgtagcaacagccgaaaccgcagcaaacagggcgacggaatggagggc
ggcacggcttcaggaaaccgcgcagcagacgatgcgagccacgacggcccgcatgaagac
tga
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