Paraburkholderia largidicola: PPGU16_27660
Help
Entry
PPGU16_27660 CDS
T10364
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
plad Paraburkholderia largidicola
Brite
KEGG Orthology (KO) [BR:
plad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
plad03016
]
PPGU16_27660
Enzymes [BR:
plad01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
PPGU16_27660
Transfer RNA biogenesis [BR:
plad03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
PPGU16_27660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
Motif
Other DBs
NCBI-ProteinID:
BCF89699
UniProt:
A0A7I8BN24
LinkDB
All DBs
Position
1:complement(3170373..3172454)
Genome browser
AA seq
693 aa
AA seq
DB search
MNVFFEESGSFKAGSVMSRQGDAFQVELPGGRRAKVRAKDVLMEFEKPSAGELMEQADAA
AQEIDLDFLWECAPEDEFPFATLGAEYFGESFGPVERAALILRMHGSPIYFRRKGRGQYQ
RAPEEQLKMALASLERKRQQALVQQGYEEELKAGRLPDGFQSKALGLLTKPDKNSIEYKA
LEAAAAARGISMARLMLECGGIPSARALHEARFLSEFFPHGTGFPPVTVGALPDDLPQAD
VEAFSIDDVTTTEIDDAFSVEHLSDGRVRIGIHIAAPALGIERGDAVDAIARGRLSTVYM
PGDKITMLPDSVVEKFTLAEGGLRPALSLYSIVNRETQEIVVSETRAELVYVKNNLRHNT
LDELVTEEALANGTGDYPHKEDIAVLWPFAQALFEKRQLARAGFGLKREVQRNTDFNFYV
EGEHVSITPRRRGSPLDTIVAELAILANSTWGAFLHDHGVPGIYRSQRAFGAPTGPKRTR
MQTTAAPHEGLGVSQYAWSTSPLRRYVDLVNQWQLIACVQHGVTAKLAAPFKPKDADLFA
VVQGFDDTYTAYADHQRRMEYFWCLRWLTQEGKKQVVASVVKGDLVRLEEVPLLLHVPGL
GVHARGTRLMLEVMSVDELTVEASVRPLHVLDAPTVTSGAEEEEETEEEIIDAADESAES
EAEAQAEADTAAAEGEQPADSNDSTQHATEQGQ
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgttttcttcgaggaatcgggtagtttcaaggccggcagcgtgatgtcgcgtcaa
ggcgacgcgtttcaggtcgagctgccgggcggacgccgcgcgaaagttcgcgcaaaagac
gtgctgatggaattcgaaaagccgtcggcgggcgaactgatggaacaggccgatgctgcc
gcacaggagatcgatctggacttcctgtgggaatgcgcgccggaagacgaatttccgttt
gccacgctcggcgccgaatacttcggcgagtcgttcggacccgtcgagcgtgccgcgctg
attttgcgcatgcacggctcgcccatctatttccgccgcaaggggcgcggccagtatcag
cgcgcgccggaagagcaactgaagatggcgctcgcttcgctggagcgcaagcgccagcag
gcgctcgtgcagcagggctacgaagaagaactgaaggcgggccgtctgccggacggcttc
cagagcaaggcgctcggcctgttgacgaagcccgacaagaattcgatcgaatataaggcg
ctcgaagcggcagcggcggcgcgcggtatttcgatggcgcgtctgatgctcgaatgcggc
ggcattccgtcggcgcgcgcgctgcacgaggcgcgcttcctgtcggaattcttcccgcac
ggcacgggttttccgcccgtgacggtcggcgcgctgccggacgatctgccgcaagccgac
gtcgaagcgttctcgatcgacgacgtgaccacgacggaaatcgacgacgcgttctccgtc
gagcatctgtccgatgggcgcgtgcggatcggcattcacatcgcggcgccggcgctgggc
atcgaacgcggcgacgctgtcgatgccatcgcgcgtggccgtctgtcgaccgtctacatg
ccgggcgacaagatcacgatgctgcccgattccgtcgtggagaaattcacgctggccgag
ggcggtttgcgtccggcgctgtcgctgtacagcatcgtgaaccgcgagacgcaggaaatc
gtggtgagcgaaacgcgggccgaactcgtctacgtgaagaacaatctgcgccacaacacg
ctcgacgaactcgtcactgaagaagcgctcgccaacggcacgggcgactatccgcacaag
gaagacatcgcggtactgtggccgtttgcacaggcgctcttcgagaagcgccagcttgcg
cgcgccggtttcggcctcaagcgcgaagtgcagcgcaatacggacttcaacttttacgtc
gaaggcgagcacgtgtcgatcacgccgcgccgccgcggttcgccgctcgacaccatcgtc
gccgaactggcgattctcgcgaattcgacgtggggcgcattcctgcacgatcacggcgtg
cccggcatctatcggtcgcagcgcgcgttcggcgcgccgacgggaccgaagcgcacccgc
atgcagacgacggccgcaccgcatgaaggtctcggcgtgtcgcagtacgcgtggagcacg
tcgccgctgcgccgctatgtcgacctcgtcaaccagtggcagctgattgcgtgcgtgcag
cacggcgtgacggccaagctcgccgcgccgttcaagccgaaggacgccgacctgttcgcc
gtcgtgcaaggcttcgacgacacctacaccgcgtacgccgatcatcagcgtcgcatggag
tatttctggtgtctgcgctggctcacgcaggaaggcaagaaacaggtggtcgcttccgtc
gtgaagggcgatctcgtgcggctcgaagaggtgccgctgttgctgcacgtgccgggtctc
ggcgtgcatgcgcgcggcacgcggctgatgctcgaagtgatgtcggtggatgaactgacg
gtcgaggcatcggtgcggccgttgcacgtactcgacgcgccgaccgtgacgagcggcgcg
gaagaagaggaagagaccgaagaagaaatcatcgacgccgccgacgaatccgccgaaagc
gaagccgaagcgcaagccgaagccgatacggccgcagcggaaggcgagcagcccgccgac
tcgaacgattcaacgcaacacgcgacggagcagggccaatga
DBGET
integrated database retrieval system
