Paraburkholderia largidicola: PPGU16_27880
Help
Entry
PPGU16_27880 CDS
T10364
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
plad Paraburkholderia largidicola
Pathway
plad02024
Quorum sensing
plad03060
Protein export
plad03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
plad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
PPGU16_27880 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
PPGU16_27880 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PPGU16_27880 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
plad02044
]
PPGU16_27880 (ffh)
Enzymes [BR:
plad01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
PPGU16_27880 (ffh)
Secretion system [BR:
plad02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
PPGU16_27880 (ffh)
Eukaryotic Sec-SRP protein
PPGU16_27880 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
AAA_22
CbiA
Zeta_toxin
AAA_16
AAA_31
AAA_30
YqeC
T2SSE
Rad17
AAA_14
AAA_33
cobW
Helicase_RecD
APS_kinase
AAA_19
AAA_18
ResIII
HMUD2
NACHT
TsaE
ATP_bind_1
Thymidylate_kin
Motif
Other DBs
NCBI-ProteinID:
BCF89721
UniProt:
A0A7I8BND4
LinkDB
All DBs
Position
1:3195867..3197234
Genome browser
AA seq
455 aa
AA seq
DB search
MLDNLTQRMARVVKTLRGEARLTEANTQEMLREVRLALLEADVALPVVRDFIAKVKEKAL
GEEVIASLSPGQALVGVVQRELTAVIGGDYEGKAAELDLAVTPPAIILMAGLQGAGKTTT
VGKLAKLLREKYKKKVLTVSCDVYRPAAIAQLKTVTEQVGADFFPSQPDQKPVDIARAAV
DWAKRHYHDVLLVDTAGRLGIDEAMMNEITALHKELNPAETLFVVDAMLGQDAVNTAKAF
NDALPLTGVVLTKLDGDSRGGAALSVRHVTGKPIKFVGVAEKLDGLEIFYPDRMANRILG
MGDILALVEEAQRGVDVQAAQKLADKVKKGGDFDLNDFRAQLSQMKKMGGLSSLMDKLPA
QFQQAASNADMGQAEKQMRRMEGIINSMTAQERAKPDLIKATRKRRIAAGAGVQVQEVNR
LLNQYDQMRTMMKKLKGGNLQKMMRGMKGMLPGMR
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgctcgacaacctcactcaacggatggcgcgcgtcgtcaagacgctgcgcggcgaagcc
cggctcaccgaggcgaatacccaggagatgctgcgcgaagtgcgcctcgcactcctcgaa
gcggacgtggcgctgcccgtcgtgcgcgacttcatcgcgaaggtgaaggagaaggcgctc
ggcgaggaagtgatcgccagcctgtcgccaggtcaggcgctggttggcgtcgtgcagcgt
gagctgacggccgtgatcggcggcgactacgaaggcaaggccgccgaactggatctcgcc
gtcacgccgcccgccattatcctgatggccggcctgcagggcgcgggtaaaaccaccacg
gtcggcaagctcgccaagctgctgcgcgagaagtacaagaagaaagtgctgacggtgtcg
tgcgacgtgtaccgccccgccgctatcgcgcagttgaagacggtgaccgaacaggtcggc
gccgacttcttcccgtcgcagccggaccagaaacccgtcgatatcgcgcgcgccgccgtc
gactgggcgaagcgccactatcacgacgtgctgctcgtcgacacggccggccgtctcggc
atcgacgaagcgatgatgaacgagatcaccgcgctgcataaggaactgaatccggccgaa
acgctgttcgtcgtcgacgcgatgctcggtcaggacgccgtgaacaccgcgaaggcgttc
aacgacgcgctgccgctcacgggcgtcgtgctgaccaagctcgacggcgactcgcgcggt
ggcgcggcgctgtccgtgcgtcacgtgacgggcaagccgatcaagttcgtcggcgtcgcg
gaaaagctcgacggcctcgaaatcttctacccggaccgcatggcgaaccggatcctcggc
atgggcgacattctcgcgctcgtcgaggaagcgcagcgcggcgtcgatgttcaggccgcg
cagaagctcgccgacaaggtcaagaaaggcggcgacttcgatctgaacgatttccgtgcg
cagctttcacagatgaagaagatgggcggtctgtcgtcgctgatggacaagctgcccgcg
cagttccagcaggccgcgtcgaatgcggacatgggccaggccgaaaagcagatgcgccgc
atggaaggcatcatcaactcgatgactgcgcaggagcgcgccaagcccgatctgatcaag
gcgacgcgcaagcgccgcatcgccgcgggcgcgggcgtgcaggtgcaggaagtgaaccgc
ttgctgaaccagtacgaccagatgcgcacgatgatgaaaaagctcaagggcggcaatctg
cagaagatgatgcgcggcatgaagggcatgttgccgggcatgcgctga
DBGET
integrated database retrieval system
