Paraburkholderia largidicola: PPGU16_28160
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Entry
PPGU16_28160 CDS
T10364
Symbol
ddl
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
plad Paraburkholderia largidicola
Pathway
plad00470
D-Amino acid metabolism
plad00550
Peptidoglycan biosynthesis
plad01100
Metabolic pathways
plad01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
plad00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PPGU16_28160 (ddl)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PPGU16_28160 (ddl)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
PPGU16_28160 (ddl)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
plad01011
]
PPGU16_28160 (ddl)
Enzymes [BR:
plad01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
PPGU16_28160 (ddl)
Peptidoglycan biosynthesis and degradation proteins [BR:
plad01011
]
Precursor biosynthesis
Amino acid ligase
PPGU16_28160 (ddl)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATPgrasp_ST
ATP-grasp
TTL
ATP-grasp_3
ATPgrasp_YheCD
PPR
BMC
Motif
Other DBs
NCBI-ProteinID:
BCF89749
UniProt:
A0A7I8BN74
LinkDB
All DBs
Position
1:complement(3225258..3226199)
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AA seq
313 aa
AA seq
DB search
MSGIDPKSFGKVAVLLGGVSAEREVSLNSGRLVLQGLRDAGVDAHPFDPSERPLAALKDE
GFVRAFNALHGGYGENGQIQGALDFYGIRYTGSGVLGSALGLDKFRTKLVWQQLGVPTPP
FEAVLRGDDYATRAKDIVAKLGLPLFVKPASEGSSVAVIKVKTADALVPALEEAVKFDKI
VVVEKSIEGGGEYTACIAGDLDLPIIRIVPAGEFYDYHAKYIANDTQYLIPCGIAAEEEQ
RLKKIARQAFDVLGCTDWGRADFMLDGEGNPYFLEVNTAPGMTDHSLPPKAARAVGISYQ
ELVVKVLALTLKD
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgagcggtatcgatcccaaatcttttggcaaggtcgcggttcttctcggcggtgtgtcc
gccgaacgcgaagtgtcgctgaactccggccgtctcgtgctgcaagggctgcgcgatgcg
ggtgtcgacgcgcatccgttcgatccgtccgagcgtccgcttgcggcattgaaagacgaa
ggctttgtgcgcgcgttcaacgcgctgcatggcggctacggtgagaacggtcagattcag
ggtgcgctggacttttacggcatccgctatacgggcagcggcgtgctcggctcggcgctc
ggtctcgacaagttccgcacgaagctcgtgtggcagcaactgggcgtgccgacgccgccg
ttcgaagcagtgctgcgcggcgacgactacgccacgcgtgcgaaggacatcgtcgcgaag
ctcggcttgccgctgttcgtgaagccggccagcgaaggttcgagcgtcgctgtcatcaag
gtgaagacggctgacgcactcgtgcccgcgcttgaagaagcggtgaagttcgacaagatc
gtcgtggtcgagaagagcatcgaaggcggcggcgagtacacggcgtgcatcgcgggcgat
ctcgatctgcccatcatccgcatcgtgcccgccggcgagttctacgactatcacgcgaag
tacatcgccaacgacacgcagtacctgattccgtgcggcattgccgctgaagaagagcag
cgcctgaagaagatcgcacgtcaggcgttcgacgtgctcggctgcaccgattggggccgc
gcggacttcatgctggacggcgaaggcaatccgtatttcctggaagtgaacacggcgccc
ggcatgaccgatcactcgctgccgccgaaggctgcgcgtgctgtcggcatcagctaccag
gaactggtggtgaaggtgcttgcattgacgctcaaggactaa
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