Paraburkholderia largidicola: PPGU16_28490
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Entry
PPGU16_28490 CDS
T10364
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
plad Paraburkholderia largidicola
Pathway
plad03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
plad00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PPGU16_28490 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plad03400
]
PPGU16_28490 (ung)
Enzymes [BR:
plad01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
PPGU16_28490 (ung)
DNA repair and recombination proteins [BR:
plad03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PPGU16_28490 (ung)
Prokaryotic type
PPGU16_28490 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
BCF89782
UniProt:
A0A7I8BM80
LinkDB
All DBs
Position
1:3268635..3269453
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AA seq
272 aa
AA seq
DB search
MNSAKRSRTPPTQPSLFTDDDTRAAAPPSPAAENQTLESQFDALPPAWRAHLKPFIDSET
YTPLCRFVDGERASGKTVYPTDVFRALRLTSPDDVKVVILGQDPYHGEDRGMPQAHGLAF
SVPPSVRPPPSLRNIFKEIAASLGHEAPQHGCLDAWARQGVLLLNTVLTVERDHAASHAK
RGWEKCTDTLIHELAMRHDGLVFMLWGAHAQAKRVLLGGKSHCVLEAPHPSPLSAHRGFL
GCRHFALANEFLEAHGRQPIDWRLPETGEVFA
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgaattccgctaaacgttcccgcactccgccgacgcagccgtcgctcttcaccgacgac
gacacccgcgccgccgcgccgccctctcccgccgccgaaaaccagacgctcgaatcccaa
ttcgacgcccttccgcccgcctggcgcgcgcacctcaaaccgtttatcgatagcgagacg
tacacgccgctgtgccgtttcgtcgacggcgagcgtgcgtccggcaagaccgtctatccc
accgatgtcttccgcgcgctgcgactcaccagtcccgacgacgtcaaggtcgtgattctc
ggccaggacccgtatcacggcgaagaccgcggcatgccgcaggcgcacggtctcgcattt
tcggtgccgccttcggtgcggccgccgccgtcgctgcgcaacatcttcaaggagatcgcc
gcgagcctgggccacgaagcgccgcagcacggctgtctcgatgcatgggcgcgacagggc
gtgctgttgctcaacacggtgctgaccgtcgagcgcgaccacgccgcgagtcacgcgaag
cgcggctgggaaaagtgcaccgacacgttgatccacgaactcgcgatgcgtcacgacgga
ctcgtgttcatgctgtggggtgcgcacgcgcaggccaagcgcgtgctgctcggcggcaaa
tcgcactgcgtgctggaagcgccgcacccgtcgccgctgtcggctcatcgcgggtttctc
ggctgccggcatttcgcgctggccaatgaatttctcgaagcacatggccgccagcccatc
gactggcgtttgccggaaacgggcgaagtattcgcctga
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