Paraburkholderia largidicola: PPGU16_29560
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Entry
PPGU16_29560 CDS
T10364
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
plad Paraburkholderia largidicola
Pathway
plad00300
Lysine biosynthesis
plad00470
D-Amino acid metabolism
plad01100
Metabolic pathways
plad01110
Biosynthesis of secondary metabolites
plad01120
Microbial metabolism in diverse environments
plad01230
Biosynthesis of amino acids
Module
plad_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
plad00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PPGU16_29560 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PPGU16_29560 (lysA)
Enzymes [BR:
plad01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
PPGU16_29560 (lysA)
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Gene cluster
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
SH3BP5
Motif
Other DBs
NCBI-ProteinID:
BCF89889
UniProt:
A0A7I8BNL1
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All DBs
Position
1:3375510..3376772
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AA seq
420 aa
AA seq
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MTQSAFAYVDGVLHAEGVSAASLAEQFGTPLYVYSRAALTEAWHAYADACAGRHATVHVA
VKANSNLAVLNLFARMGAGFDIVSGGELARVLAAGGKAENTVFSGVGKSVAEMREGLAAG
VKCFNVESIPELDRLNTVASEMGKKAPVSLRVNPDVDAKTHPYISTGLKSNKFGVAFDDA
RATYRAASAMKNLDVVGIDCHIGSQITEVAPYLDAVDKLLELVEQIEADGVKIKHIDVGG
GLGITYDDETPPDIGDFVRTLLDRIEARGHGHREVYFEPGRSLVGNAGMLLTRVEFLKPG
AEKNFAIVDAAMNDLARPAMYEAYHAIEPVVQRAGDKHVYDVVGPVCESGDWLGRERELA
VEPGDLLAIRSAGAYGFAMSSNYNTRARAAEVMVDGDQAYVVRKREEVKDLFAGETVLPE
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgactcaatccgcttttgcctacgtcgacggcgtgctgcacgctgaaggcgtgtccgcc
gcatcgcttgccgagcagttcggcacgccgctctatgtctactcgcgcgctgcgctaacc
gaggcgtggcacgcttacgccgacgcatgcgcgggccggcacgcgaccgtgcacgtcgcg
gtcaaggcgaacagcaacctcgccgtgctcaatctgttcgcgcgcatgggtgcggggttc
gacatcgtgtcgggtggtgaactggcgcgcgtgctcgcggcaggcggcaaagcggaaaac
accgtgttttcgggcgtcggcaagagcgtcgcggaaatgcgcgaggggctcgcggcgggt
gtgaagtgcttcaatgtcgaatcgattcccgaactcgaccgcctcaataccgttgcgagc
gaaatgggcaagaaagcgcccgtgtcgctgcgcgtgaatcctgatgtcgacgcaaagacg
catccgtatatctcgacgggcctcaagtcgaacaagttcggcgtcgcattcgacgacgcg
cgcgccacgtatcgcgccgcctccgcgatgaagaacctcgatgtggtgggcatcgactgc
catatcggttcgcagatcacggaagtcgcgccgtatctcgacgccgtcgacaagctgctc
gaactcgtcgagcagatcgaagcggacggcgtgaagatcaagcatatcgatgtcggcggc
ggcctcggcatcacctacgacgacgaaacgccaccggatatcggcgatttcgtgcgcacg
ctcctcgaccggatcgaagcacgcgggcacggccatcgcgaagtgtatttcgagccgggc
cgctcgctcgtcggcaatgccggcatgctgcttacgcgcgtcgagtttctgaagccgggt
gctgagaagaactttgcgatcgtcgacgcggcaatgaacgacctcgcgcgccctgccatg
tacgaggcgtatcacgcgatcgaacccgtcgtgcagcgtgcaggcgacaagcatgtgtat
gacgtcgtcggtcccgtgtgtgaaagcggcgactggctcggtcgcgaacgcgaactcgct
gtcgaaccgggcgatctgctcgcgatccgttccgcgggcgcctacggtttcgcgatgagc
tcgaactacaacacgcgtgcgcgcgcggccgaagtcatggtcgacggcgaccaggcgtac
gtcgtacgcaaacgtgaggaagtgaaagatctattcgctggcgagacggttctgcccgaa
taa
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