Paraburkholderia largidicola: PPGU16_36810
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Entry
PPGU16_36810 CDS
T10364
Name
(GenBank) farnesyl-diphosphate farnesyltransferase
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
plad Paraburkholderia largidicola
Pathway
plad00100
Steroid biosynthesis
plad00909
Sesquiterpenoid and triterpenoid biosynthesis
plad01100
Metabolic pathways
plad01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
plad00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
PPGU16_36810
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
PPGU16_36810
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
plad01006
]
PPGU16_36810
Enzymes [BR:
plad01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
PPGU16_36810
Prenyltransferases [BR:
plad01006
]
Terpene biosynthesis
Squalene/phytoene synthase
PPGU16_36810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
AAA_SelU
Motif
Other DBs
NCBI-ProteinID:
BCF90614
UniProt:
A0A7I8BPJ8
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All DBs
Position
2:complement(437740..438771)
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AA seq
343 aa
AA seq
DB search
MLGPLLKGVSRSFYLTLRILPAGMRDPIGLAYLLARAADTIADTALIPPEQRLALLLALR
DQVNGATDDGELARRLANEVAGQQTQSDEKVLLESIAPALDVLQQLDAADRAAVREIVTT
LTTGMEFDLRTFPDERSGRIVALREWDELDRYTYLVAGCVGEFWTKMTYMHLPGTLKTGE
ATMLERGVRFGKALQMTNVLRDCGKDLRIGRCYLPSTMLDRFGLTPQMLLEPQASQRAQP
LMHELVRQSLDHFRAALDYTLAIPRFSLRLRLACVWPIVIGLETMLLLVDNAHWLEPAKV
SKIQRKQVYGILARSLPVSVSDAGLRSWIEGLIGAIESRIGVR
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
ttgctgggtccgttgctcaaaggggtttcccgttccttctatctgacgctgcgcattctg
cctgccggcatgcgcgatcccatcgggctcgcgtatctgctcgcgcgcgccgcggacacg
atcgccgataccgcgctgattccgcccgagcagcggctcgcgctgctgcttgcgttgcgt
gatcaggtcaacggcgcgaccgacgacggcgagcttgcccggcgtctcgcgaacgaagtg
gcggggcagcagacgcaatcggatgaaaaggtgctgctcgaatcgattgcacccgcgctc
gacgtgctccagcaactcgacgcggccgaccgcgccgctgtgcgcgagatcgtcacgaca
ttgacgacgggcatggaattcgacctgcgcaccttccccgacgaacgctcgggccgtatc
gtcgcgctgcgcgaatgggacgaactggatcgctacacgtatctggtcgcgggttgcgtc
ggcgagttctggacgaagatgacctacatgcatctgcccggcacgctgaagaccggcgag
gccacgatgctggagcgcggcgtacgcttcggcaaggcgctgcagatgaccaacgtgctg
cgcgattgcggcaaggatttgcgcatcggccgctgctacctgccgtccacgatgctcgat
cgcttcggcctgacgccgcagatgctgcttgagccgcaagcctcgcagcgcgcgcaaccg
ttgatgcacgaactggtgcgccagtcgctcgatcacttccgcgcggcgctcgactacacg
ctcgccattccgcgcttctcgctgcgtttgcgcctcgcgtgcgtgtggccgatcgtgatc
ggactcgaaacgatgttgctgctggtcgataacgcgcattggctggagcctgcaaaggtg
tcgaagatccagcgcaagcaggtgtacggcattctcgcgcgctcgctgcccgtgtcggtg
tcggatgcggggctgcgcagctggatcgaagggctgatcggcgcgatcgaatcgcgcatc
ggcgttcgatag
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