Paraburkholderia largidicola: PPGU16_38540
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Entry
PPGU16_38540 CDS
T10364
Name
(GenBank) hypothetical protein
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
plad Paraburkholderia largidicola
Pathway
plad03420
Nucleotide excision repair
Brite
Enzymes [BR:
plad01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
PPGU16_38540
Transcription machinery [BR:
plad03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
PPGU16_38540
Chromosome and associated proteins [BR:
plad03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
PPGU16_38540
DNA repair and recombination proteins [BR:
plad03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
PPGU16_38540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
BCF90787
UniProt:
A0A7I8BPS2
LinkDB
All DBs
Position
2:complement(626765..629032)
Genome browser
AA seq
755 aa
AA seq
DB search
MTYIVAVRTLCEFTARRGDLDLRFTPAPSALEGIAGHQAVTARRASGYEAEITLTGTHGG
LTVRGRADGYDPALNRLEEIKTHRGDLERMPANHRALHWAQALVYGHLLCEARALDELTV
ALVYFDIADQKETVLTEQHTAASLRAFFEDQCERFIAWAAREEAHREARNAALNALRFPY
GEFRSGQRELSVAVFRAARDGHCLMAQAPTGIGKTLGTIFPLLKACGADHLDRVFFLTAK
TPGRALALEAVESLHRGETTLPLRTLELVARDKACEHPDNSCDGESCPLARGFYDRLPAA
RDTALQARTLDRAAVREAALAHGICPYYLAQEMARWCDIVIGDYNYYFDSSAMLYALTQL
NGWRVAVLADEAHNLPDRARRMYSATLDQHAFRGARHTAPTALKKPFDRLSREWNALNRE
RDAAYDVLPEVPPKLQSALQNLIASIGDQLAETPQSVDENALRFYFDALHFMSLVEQFGD
HSIVDVTLEAQQGAARAKPATQICVRNVIPAPFLKPRYAAARATIVFSGTLSPQHFYRDM
LGLPDETGWLDVEGPFRAEQLDVHVAHHVSTRWRDRERSLEPIVDLIAQQYAARPGNYLG
FLSSFDYLQRVAGSMRERHPHVPIWTQEPRMDETARDAFLARFTTSGAGVGFAVLGGAFS
EGIDLVGERLVGAFIATLGLPQMNDVNEQMRRTFDAQFGNGYDYAYLYPGMQKVVQAAGR
VIRTEQDAGVVHLIDDRYRRADVKRLLPRWWKVVT
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
atgacgtacatcgtcgccgtgcgcacgctctgcgaattcaccgcgcggcgcggcgatctc
gatctgcgcttcacgcccgcgccgtcggcgctcgaaggcatcgccggccatcaggccgtg
acggcacgccgtgcgtccggctatgaagcggagatcacgctgacgggtacgcatggcggt
ctcacggtgcgcggtcgcgccgatggttacgatcccgcgctgaaccggctcgaagaaatc
aagacgcaccgcggcgatcttgaacgaatgcctgcgaatcatcgtgcactgcattgggcg
caggcgctggtgtatgggcatctgctgtgcgaggcgcgcgcgctcgacgaattgacggtc
gccctggtgtacttcgatatcgccgaccagaaggaaaccgtgctgacggaacagcacacg
gccgcgtcgctgcgcgcgttcttcgaggatcaatgcgagcgcttcatcgcgtgggcggcg
cgtgaagaggcgcatcgcgaggcgcgcaacgccgcattgaatgcgctgcgtttcccgtac
ggcgagtttcgcagcggtcagcgtgaactgtccgtggccgtgtttcgcgcggcgcgcgac
gggcactgtctgatggcgcaggcgccaacgggcatcggcaagacgctcggcacgatcttt
ccgctgctgaaggcgtgcggtgcggatcatctggaccgtgtgttcttcctgacggcaaaa
acgccgggccgcgcgctcgccctcgaagccgtcgaatccctgcatcgcggtgaaaccacg
ctgccgttgcgcacgctcgaactcgtcgcgcgcgacaaagcctgcgagcatcccgacaac
tcgtgcgacggcgaatcctgtccgctcgcgcgcggcttctacgaccgcctgcccgccgcg
cgcgacacggcgttgcaggcgcgcacgctcgaccgcgcagccgtgcgcgaagcggcgctc
gcgcatggcatctgtccgtactatctcgcgcaggaaatggcgcgctggtgcgacatcgtg
atcggcgactacaactattacttcgacagcagcgcgatgctttacgcgcttacgcagctg
aatggctggcgcgtcgccgtgctcgccgacgaagcgcacaatctgcccgaccgcgcgcgc
cgcatgtacagcgcgacactcgatcagcacgcgtttcgcggcgcgcgccatactgcgccc
accgcactgaaaaagccattcgatcgcctgagccgcgaatggaatgcgttgaaccgcgag
cgggatgctgcgtatgacgtgcttcccgaagtaccgccaaagctgcaatcggctttgcaa
aacctgatcgcctccattggcgatcagcttgcagaaaccccgcaatccgtcgatgaaaat
gcgctgcgtttctatttcgacgcgctgcatttcatgtcgctcgtcgagcagttcggcgat
cattccatagtcgacgtaacgcttgaagcccagcaaggcgcagcccgcgcgaaacctgcc
acacagatctgcgtgcgcaacgtgattccggcgccgttcctcaagccgcgctatgccgcc
gcgcgcgcgacgatcgtgttctccggcacgctcagcccgcagcacttctatcgcgacatg
ctcggtctgcccgacgagactggctggctcgacgtcgaagggccgttcagggccgagcaa
ctggatgtgcatgtcgcgcatcatgtgtcgacgcgctggcgcgaccgcgagcgttcgctc
gaaccgatcgtcgatctgatcgcgcagcagtacgccgcgcgtccgggcaactacctcggc
tttctgagcagcttcgactacttgcagcgcgtcgccggatcgatgcgcgagcggcatccg
cacgtgcccatctggacgcaggagccgcgcatggacgagaccgcgcgcgacgcgttcctc
gcgcgcttcacgacgagcggcgcgggtgtcggtttcgcggtgctgggcggcgcgttttcg
gaaggcatcgatctggtcggcgagcggctggtcggcgcgttcatcgcgacgctcggcttg
ccgcagatgaacgacgtcaacgagcagatgcgccgcaccttcgatgcgcagttcggcaac
ggctacgactatgcgtatctgtatccgggcatgcagaaggtcgtgcaggcggcggggcgg
gtgattcgcaccgagcaggatgcgggcgtcgtgcatctgatcgacgaccggtatcggcgc
gcggatgtgaagcgcttgttgccgcgctggtggaaggtcgtgacatag
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