Paraburkholderia largidicola: PPGU16_38760
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Entry
PPGU16_38760 CDS
T10364
Symbol
rpoN_2
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
plad Paraburkholderia largidicola
Pathway
plad02020
Two-component system
plad02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
plad00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PPGU16_38760 (rpoN_2)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
PPGU16_38760 (rpoN_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
plad03021
]
PPGU16_38760 (rpoN_2)
Transcription machinery [BR:
plad03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PPGU16_38760 (rpoN_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
DUF2218
Motif
Other DBs
NCBI-ProteinID:
BCF90809
UniProt:
A0A7I8BR39
LinkDB
All DBs
Position
2:complement(663143..664648)
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AA seq
501 aa
AA seq
DB search
MPPTIELRAKQTFALTPRLQQSVRLLQLSSLEFQQELRNALDTNPFLEYDPSVSEDLSAG
KTAENNGADGETLPSNERDNAMEGSSSEPATESVASSSDDGGDYSNNDYSSGDYSGDAYG
RGPSRYNGDSDAADPTEWARVQPTLHEQLHDALRLYRLDDRDREVARLIIEALDDDGYLR
QDLADLTDVFDIEPALTEDELLVALRLVQTLDRPGLAARSLSECLALQIDALPADTPGRD
VAKQVVEHHLDRLARREHAELQKQIGCDAEELRVACALVRKLDPKPGNSYGRADDNYIVP
DVIVRSVRNKWVVTVNPAVLPRARIHRMYAELFAQSAGASRSPLAQQLQEARWLIRNAQQ
RFETIQRVAECIVAHQKPFFQYGEIALKPLVLRDVAEELGLHESTISRATGNKYMATPRG
IFEFKHFFPRELGTESGGTCSAAAVRALLKEMIAAENTRDPLSDVALAKMLADQGVLVAR
RTVAKYRHLMKVPPAELRRQV
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgccgcctacaatcgaactacgcgcgaagcaaactttcgcgctcacaccgcgtctgcag
cagtccgtgcgcctgcttcaactgtcgtcgctggaatttcagcaggaactgcgcaacgcg
ctcgacaccaatcccttcctcgaatacgacccgtctgtttcggaagatctgtcggcaggc
aagacggcagagaacaacggagccgatggcgagaccctgccttcgaacgaacgcgacaac
gcgatggaaggttcgtcttcggagccggccacggaaagcgttgcatcgtcgtcggatgat
ggcggcgattactcgaacaacgactattcgagtggcgactactcaggcgatgcgtacggc
cgtggcccgtcgcgctacaacggcgattcggatgccgccgacccgaccgaatgggcccgc
gttcaaccgacgctgcacgagcagttgcacgatgcgttgcgtctctatcggctcgacgac
cgcgaccgtgaagtggcgcgcctcatcatcgaagcactcgatgacgatggctatctgcgc
caggacctcgccgatctcaccgacgtcttcgacatcgaacccgcgttgacagaagacgaa
ctgctggtcgcgctgcggctcgtgcagacgctggaccgtccgggactcgcagcgcgttcg
ctgtcggagtgtcttgcgctgcagatcgacgcattgcccgccgatacgccgggccgcgac
gtggcaaaacaggtcgtcgagcatcatctcgaccgcctcgcgcgccgcgaacatgcggag
ttgcagaagcagatcggctgcgatgccgaggaattgcgtgtggcgtgcgcgctcgtgcgc
aagctcgatccgaagccgggcaattcatatggccgcgcggacgacaactacatcgtgccg
gatgtgatcgtgcgcagtgtgcgcaacaagtgggtcgtgaccgtgaatcccgctgtgctg
ccgcgtgcgcgcattcaccgtatgtacgcggaactgttcgcgcagtcggcaggcgcgagc
cgctcgccgctcgcgcagcagttgcaggaagcgcgctggctgatccgcaacgcgcagcag
cgcttcgaaacgattcagcgcgtggccgagtgcatcgtcgcgcatcagaagccgttcttc
cagtacggcgaaattgctttgaaaccgctcgtattgcgcgacgtggccgaagaactcggc
ctgcacgaatcgacgatttcgcgcgcgacgggcaacaagtacatggcaacgccgcgcggc
atcttcgaattcaagcatttcttcccgcgcgagctgggcacggaaagcggtggcacctgt
tcggcagcggccgtgcgcgcgctgctcaaggaaatgattgccgcggaaaacacgcgcgat
ccgctgtcggatgtcgcgctcgcgaagatgctcgccgatcagggcgtgctcgtcgcgcgc
cgcacggtggcgaaatatcgacacctgatgaaggtgccgcccgcggagctgcgtcgccag
gtttga
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