Paraburkholderia largidicola: PPGU16_38830
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Entry
PPGU16_38830 CDS
T10364
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
plad Paraburkholderia largidicola
Brite
KEGG Orthology (KO) [BR:
plad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
plad03032
]
PPGU16_38830
03400 DNA repair and recombination proteins [BR:
plad03400
]
PPGU16_38830
Enzymes [BR:
plad01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
PPGU16_38830
DNA replication proteins [BR:
plad03032
]
Prokaryotic type
DNA Topoisomerases
PPGU16_38830
DNA repair and recombination proteins [BR:
plad03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
PPGU16_38830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
BCF90816
UniProt:
A0A7I8BPV3
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All DBs
Position
2:668255..669457
Genome browser
AA seq
400 aa
AA seq
DB search
MKTMTRNAIDAIAEGLSTTMPAGLRHADDTRPGYTRRKLRNGFAYFDLDGKRIDDEAQIA
RINALAVPPAYTDVWICPDPRGHIQATGRDARGRKQYRYHPQWRETRDADKFGRMAAFGH
ALPKIRARVARDLAREGMPREKVIAAVVHLLDTTLIRIGSVEYARDNQSYGLTTLRKKHV
TIRAGEVRFRFAGKSGIEHDVTVDNARVKRIVRRCAELPGHDLFQYIDEDGARHTVGSAD
INEYLRDISSADFSAKDYRTWAGSVYAMAALRQLVCESAADTRRHVVATVKEVATLLRNT
PAVCKRCYIHPEVIAAFEAGELPDLLPQRAKRHMKVDEAAFAALLLQVEKRTRLASRNAR
KGGKPSASADVESARLAKLLTKSSALRKQADAQKRTAHTA
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaccatgactcgcaacgcgatcgatgcgatcgccgaaggactctcgaccacgatg
cccgcggggctgcggcatgcggacgacacgcggcccggctatacgcgtagaaagctccga
aacggtttcgcctatttcgatctcgacggcaaacgcatcgacgatgaggcgcagatcgcg
cgcatcaacgcgctcgccgttccacccgcctacaccgacgtctggatctgccccgacccg
cgcggccacatccaggcaacgggccgcgatgcgcggggccgcaaacagtaccgctaccac
ccgcaatggcgcgagacgcgcgatgccgacaagttcggccgcatggctgccttcgggcat
gcactgccgaagatacgcgcgcgagtcgctcgcgatctcgcgcgcgaaggcatgccgcgc
gagaaagtcatcgccgcagtcgtgcatctgctcgatacgacgctgatccggatcggcagc
gtcgaatatgcgcgcgacaaccagtcctatggcctcaccacgctgcgcaagaagcacgtg
acgattcgcgcgggcgaagtgcggttccggttcgcgggaaagagcggcatcgagcacgac
gtcactgtcgacaatgcccgcgtcaagcgcatcgtgcgccggtgcgcggagttgccgggt
cacgacctgttccagtacatcgacgaagacggcgcgcgccatacggtcggctctgccgat
atcaacgagtatttgcgcgacatcagcagcgcggacttctcggcgaaggactatcgcacg
tgggcaggcagtgtgtacgcgatggcggctttgcggcaactggtgtgcgaaagcgccgcc
gacacgcgccgtcatgtcgtcgcgaccgtaaaagaagtggccacgttgttacgcaatacg
cccgctgtatgcaagcgctgctatatccaccctgaagtgatcgcggcatttgaagcgggc
gaattgccagacctgctgccgcagcgcgcgaagcgccacatgaaggtcgacgaagcggca
ttcgccgcactattgctgcaagtggaaaagcgcacgcggcttgcaagccgcaatgcgcgc
aagggcggcaagccatccgcgtcggcggacgtcgagagcgcgcggctcgcgaagctgctc
acgaaatcgagcgcactgcgcaagcaggcggacgcgcaaaagcggaccgcccataccgcg
tga
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