Paraburkholderia largidicola: PPGU16_39020
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Entry
PPGU16_39020 CDS
T10364
Name
(GenBank) cyclic di-GMP phosphodiesterase
KO
K14051
c-di-GMP phosphodiesterase Gmr [EC:
3.1.4.52
]
Organism
plad Paraburkholderia largidicola
Pathway
plad02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
plad00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PPGU16_39020
Enzymes [BR:
plad01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
PPGU16_39020
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_9
PAS_4
PAS
PAS_8
GGDEF_2
Diguanyl_cycl_sensor
PAS_7
Cas10-Cmr2_palm2
PAS_10
Motif
Other DBs
NCBI-ProteinID:
BCF90835
UniProt:
A0A7I8BQR5
LinkDB
All DBs
Position
2:696389..698392
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AA seq
667 aa
AA seq
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MNDDQHDQVLFARFGTSSPCWRLSSDSNALELTPETDDDTATVAIALSGAQAAQIRRLTG
VTSHLTMDVRLFGEALRLHLVGKKLNSSTWAGTASGYEDTESVARDLVHGLSFAEQVVSE
VNSVVVIVDKNGRIQRFNRLAEELTGMKEEDVVGRSVWALFMSSEAGAASSQNISGFFNQ
GVAYEVERRVRTVHGERLFLFRNKFVMSGSGVDEQFLICSGTDITEERRAQERLSELANT
DSLTGLPNRNAIHDKTRAAIASAAAGESVGILFLDLDNFKKVNDHYGHVFGDRLIQDVSS
AVRECLADEDTLARLGGDEFIVLSPVASVASMEAMAQRILERLRVPFSLGLVEVYTGCSI
GIAMFPEHGDSLEALIRAADTAMYVAKDDGKRTYRVFSPEMNRKVAEYMWLDTNLRRGLE
EGQLTLHYQPKLSLATGTVYGVEALVRWNSPERGQIMPAAFIRYAEESGLIGPLGRWVMQ
TAAEQAAQWKARGLSLRVAINVSARQLVDTAVVSHFTEALQRAQLDPCLLDIELTESCLI
EDEAAAIDLITQFRDLGAQVHLDDFGTGYSSLSQLGRIPLDVIKLDRSFVSSINADRKSQ
ALVRSMVAVAQALQLKVVAEGIETESEELFMKGLGVEYVQGFLYGRPMPAAEFERWLHDR
QKIRLIA
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgaacgacgatcaacacgatcaggtgcttttcgcccggttcggaacgagcagcccctgc
tggcggctgtcgagcgacagcaatgcgctcgaactgacgcccgaaacggatgacgacaca
gccacggtcgccattgccctgtcgggtgcgcaggccgcgcagattcgcaggctcacgggc
gtcacctcgcatctcaccatggacgtgcgcctgttcggcgaagcgctgcgtctgcatctg
gtcggcaagaagctcaacagcagcacctgggcgggcacggcttccggctacgaagacacc
gagtccgtcgcgcgcgatctggtgcatgggctgtcattcgccgagcaggtcgtgtcggaa
gtcaattccgtcgtcgtgatcgtcgacaagaacggccgcatccagcgcttcaaccggctc
gccgaagaactcacgggcatgaaggaagaagacgtggtcgggcgcagtgtgtgggcgctc
ttcatgtcgtcggaagcgggcgcggcgtcgagccagaacatttcgggcttcttcaatcag
ggcgtcgcgtacgaagtcgagcggcgcgtgcgcaccgtgcacggcgagcggcttttcctc
tttcgcaacaaattcgtgatgagcgggagcggcgtcgacgaacagtttctgatctgctcg
ggcaccgacatcaccgaggaacgccgcgcgcaggaacgtctgtcggaactggccaacacc
gattcgctgacgggcctgcccaaccgcaacgcgattcacgacaagacgcgcgcggccatc
gccagcgcggcggcgggcgaatccgtcggcatcctgtttctcgatctcgacaatttcaag
aaggtcaacgaccactacggccacgtgttcggcgaccggctgatccaggacgtgtcgtcg
gccgtgcgcgagtgtcttgccgacgaggacacgctcgcgcgcctgggcggcgacgagttc
atcgtgctgtcgccggttgcgtcggtggcgtcgatggaagcgatggcgcagcgcattctg
gagcggctgcgcgtgccattcagcctcgggctggtcgaggtctacaccggctgctcgatc
ggcattgcgatgttccccgaacatggcgacagcctcgaagcgctgatccgcgccgccgac
accgccatgtacgtggccaaggacgacggcaagcgcacgtatcgcgtgttctcgccggag
atgaaccgcaaggtcgccgagtacatgtggctcgatacgaatctgcggcgcggcctcgaa
gaaggccagctgacgctgcactatcagccgaagctctcgctggccacgggcaccgtgtac
ggcgtggaggcgctggtgcgctggaattcgccggagcgcgggcagatcatgcccgccgcg
ttcatccgctacgcggaagagtcggggctgatcgggccgcttggccgttgggtgatgcaa
acggcggccgaacaggccgcgcaatggaaggcgcgcgggctgtcgctgcgcgtggcgatc
aacgtgtcggcgcggcaactggtggatacggccgtggtgtcgcatttcacggaggccctg
cagcgcgcgcaactcgatccttgcctgctcgacatcgagctgacggaaagctgcctgatc
gaagacgaagcggccgcgatcgacctgattacgcaattccgcgatctcggcgcgcaggtc
catctggacgatttcggcaccggctattcgtcgctgtcgcagcttgggcgcattccgctc
gacgtgatcaagctggaccgcagcttcgtgagttcgatcaacgcggacaggaaatctcag
gcgctggtgcgctcgatggtggccgtcgcgcaagcgctgcaactgaaggtggtggcggaa
gggatcgagacggaatcggaagagctgttcatgaagggactgggcgtcgaatacgtacag
ggttttctgtacggcaggccgatgcccgcagccgaattcgagcgctggctgcatgacagg
cagaagatccgcttgatcgcctga
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