Paraburkholderia largidicola: PPGU16_66360
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Entry
PPGU16_66360 CDS
T10364
Symbol
fadD-2
Name
(GenBank) long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
plad Paraburkholderia largidicola
Pathway
plad00061
Fatty acid biosynthesis
plad00071
Fatty acid degradation
plad01100
Metabolic pathways
plad01212
Fatty acid metabolism
plad02024
Quorum sensing
plad04146
Peroxisome
Module
plad_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
plad00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
PPGU16_66360 (fadD-2)
00071 Fatty acid degradation
PPGU16_66360 (fadD-2)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
PPGU16_66360 (fadD-2)
09145 Cellular community - prokaryotes
02024 Quorum sensing
PPGU16_66360 (fadD-2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
plad01004
]
PPGU16_66360 (fadD-2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
plad04147
]
PPGU16_66360 (fadD-2)
Enzymes [BR:
plad01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
PPGU16_66360 (fadD-2)
Lipid biosynthesis proteins [BR:
plad01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
PPGU16_66360 (fadD-2)
Exosome [BR:
plad04147
]
Exosomal proteins
Exosomal proteins of breast milk
PPGU16_66360 (fadD-2)
Exosomal proteins of breast cancer cells
PPGU16_66360 (fadD-2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
BCF93569
UniProt:
A0A7I8BZ46
LinkDB
All DBs
Position
PPGU16_p1:1067509..1069200
Genome browser
AA seq
563 aa
AA seq
DB search
MDDSHISPRHCTKPSVEGHASKRHWIASYGSIPAEIDADRYPSVNALLEGAMREFAAKPA
FRAFGQTLTYADIDRLSSAFAAYLQKVAGVGKGDRVAVMLPNLLAFPIAFIAIARIGAVQ
VNVNPLYTARELEHQLNDAGVETIVVFDGSTRTLADVVSRTKIRTVITAGAGDGSGATLP
GPAADPALRGAITLPQALAQGERLVADPVDVTGSDLLFLQYTGGTTGLSKGAALSHRNLV
ANIEQFKAFMPDSLRPGVEVVVTAIPLYHIFALTVNFLTYFSVGAENWLVANPRDVEPFI
DVLKAARPTVFVGVNTLYAGLAAHPRLAEVDWSRLRLSAGGGAAVIDIVSGRWKSVTGSF
IREGYGLSETSPVVSFNPQFIDGFTGNTGLPVPSTDVKLLDDDNREAGIGEAGEICVKGP
QVMRGYWKQPEANARAFTADGYFRTGDIGVFDDKGFLKIVDRKKDMVIVSGFNVYPNEVE
AVATAFPGVAECACIGVPDERTGEALRLFVVTAPGVDVTQQALIAHCRASMAAYKVPKAI
QFVDALPKSTVGKILRRELRRVE
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
gtggacgacagccacatcagcccccgtcattgcacgaaaccatccgtggaaggccacgcc
agcaaacggcactggatcgcctcgtacggctcgatccccgccgagatcgatgccgaccgc
tatccgtccgtcaacgcgctgctggaaggcgcaatgcgcgagttcgcggcgaagcccgcg
tttcgcgcgttcggccaaacgttgacttatgcggacatcgaccgcctgtcgtcggcattc
gctgcgtatttgcagaaggtggcgggcgtcggcaagggcgaccgcgtggccgtcatgctg
cccaacctgctggcgtttccgattgcgttcatcgccatcgcgcggatcggcgcggtgcag
gtcaacgtcaatccgctctacacggcgcgcgaactggagcatcaactgaacgacgcgggt
gtcgaaacgatcgtcgtgttcgacggctcgacgcgcacgctggccgacgtcgtcagccgc
acgaagatcaggacggtgatcacggcaggcgcgggcgacggcagcggcgccacgcttccc
ggacctgccgccgacccggcactgcgcggcgcgatcacgctgccgcaagcgctcgcgcaa
ggcgagcggctcgtcgccgaccctgtcgacgtcaccggcagcgatctgctctttctgcaa
tacacgggcggcacgacggggctgtcgaagggcgccgcgctgtcgcatcgcaacctggtg
gcgaacatcgagcagttcaaggccttcatgcccgattcgctgcgcccgggcgtcgaggtc
gtcgtcacggcgattccgctgtatcacatcttcgcgctgacggtgaacttcctcacgtac
ttctccgtgggcgcggagaactggctggtggcgaatccgcgcgacgtcgagccgttcatc
gacgtgctgaaggccgcgcgtccgaccgtgttcgtcggcgtcaacacgctgtacgcgggg
ctggccgcgcatccgcgcctcgcggaagtggactggtcgcggctcaggctgtccgcgggc
ggcggggcggccgtgatcgatatcgtctccgggcgctggaaatccgtgacgggcagcttc
atccgcgagggctatgggttgtcggagacctcgcccgtcgtgtcgttcaatccgcagttc
atcgacggcttcacgggcaacacgggcctgcccgtgccgtccaccgacgtcaagctgctc
gacgacgacaaccgcgaagcgggtatcggcgaggcgggcgagatctgcgtcaagggcccg
caagtgatgcgcggctactggaagcagcccgaggccaacgcgcgcgccttcacggcggac
ggctacttccgtaccggcgacattggcgtgttcgacgacaagggctttctgaagatcgtc
gaccgcaagaaggacatggtgatcgtctccggcttcaacgtttaccccaacgaagtcgaa
gcggtggcgaccgcgtttcccggcgtggccgaatgcgcgtgtatcggcgtgccggatgaa
agaacgggcgaggcgctcaggctgttcgtcgtcacggcaccgggcgtcgacgtgacgcag
caggcgctgatcgcgcactgccgcgcgagcatggcggcctacaaggtgcccaaggccatt
cagttcgtcgatgcgttgccgaaatcgacggtcggcaaaatcctgcgtcgcgagttgcgg
cgcgtcgagtga
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