Paraburkholderia largidicola: PPGU16_80200
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Entry
PPGU16_80200 CDS
T10364
Symbol
hupB_3
Name
(GenBank) DNA-binding protein HU-alpha
KO
K03530
DNA-binding protein HU-beta
Organism
plad Paraburkholderia largidicola
Brite
KEGG Orthology (KO) [BR:
plad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
plad03032
]
PPGU16_80200 (hupB_3)
03036 Chromosome and associated proteins [BR:
plad03036
]
PPGU16_80200 (hupB_3)
03400 DNA repair and recombination proteins [BR:
plad03400
]
PPGU16_80200 (hupB_3)
DNA replication proteins [BR:
plad03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
PPGU16_80200 (hupB_3)
Chromosome and associated proteins [BR:
plad03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
PPGU16_80200 (hupB_3)
DNA repair and recombination proteins [BR:
plad03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
PPGU16_80200 (hupB_3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
DUF2267
DUF937
Motif
Other DBs
NCBI-ProteinID:
BCF94953
UniProt:
A0A7I8C299
LinkDB
All DBs
Position
PPGU16_p2:complement(236704..236982)
Genome browser
AA seq
92 aa
AA seq
DB search
MNKHELIDAVASTTGESKASTGEAIDAILEAVTAAVTRGETVQLIGFGSFSTGARAERAG
RNPSTGETITIPAAKTVKFTAGKGFKDAVNAA
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaacacgaactgattgatgctgttgcatctaccacaggcgaaagcaaggccagc
acgggcgaagccattgatgccattctcgaggccgtgacggcggcggtcacgcgcggcgaa
acggtccagctgatcggattcggctcgttttcgacgggtgcgcgcgccgagcgcgcgggg
cgcaacccttctaccggcgagacaatcaccatccccgcggcgaagaccgtcaagttcacc
gcaggtaagggattcaaggacgcagtgaatgccgcctga
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