Plasmodium sp. gorilla clade G2: 39739761
Help
Entry
39739761 CDS
T10353
Symbol
PADL01_0208500
Name
(RefSeq) ATP-dependent RNA helicase UAP56
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
plag Plasmodium sp. gorilla clade G2
Pathway
plag03013
Nucleocytoplasmic transport
plag03015
mRNA surveillance pathway
plag03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
plag00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
39739761 (PADL01_0208500)
09122 Translation
03013 Nucleocytoplasmic transport
39739761 (PADL01_0208500)
03015 mRNA surveillance pathway
39739761 (PADL01_0208500)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plag03019
]
39739761 (PADL01_0208500)
03041 Spliceosome [BR:
plag03041
]
39739761 (PADL01_0208500)
Enzymes [BR:
plag01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
39739761 (PADL01_0208500)
Messenger RNA biogenesis [BR:
plag03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
39739761 (PADL01_0208500)
Spliceosome [BR:
plag03041
]
Complex C
Other components
EJC/TREX
39739761 (PADL01_0208500)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
39739761 (PADL01_0208500)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Utp25_C
Motif
Other DBs
NCBI-GeneID:
39739761
NCBI-ProteinID:
XP_028536329
PlasmoDB:
PADL01_0208500
LinkDB
All DBs
Position
2:complement(330892..332649)
Genome browser
AA seq
458 aa
AA seq
DB search
MASMDHNAQDELVDYEDDENILDSKDVKGNLGNNILNNNNKGGAMRGSYATVHTGGFKDF
FLKPELLRAISESGFEHPSEVQQETIPAAITGTDILCQAKSGMGKTAVFVLSILQQLDTN
ENQDMQDTKEMNNENNNNNGDNKFVRCLGLAHTRELAYQIKNEFDRFSKYLKNVRCEVVY
GGISMNKHIKLFKEDNIPHIIIGTPGRILALIREKYLITDKIQHFVLDECDKCLEKLDMR
SDVQKIFISTPLKKQVMFFSATMAKEMRDVCKKFLQNPVEIFIDDEAKLKLHGLLQHYVK
LQEKDKTRKLIEILDALEFNQVIIFVKSVTRAITLDKLLTECNFPSIAIHGGLEQQERIE
RYDKFKKFENRILVSTDLFGRGIDIERVNIVINYDMPENSDSYLHRVGRAGRFGTKGLAV
TFVSSQEDTLALNEVQTRFEVAISEMPNKIDCNEYINQ
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaatggatcataatgctcaagatgaattagttgattatgaagatgatgagaat
atattagatagcaaagatgttaaagggaatttaggaaataatattttaaataataataat
aagggtggagctatgagaggtagttatgcaactgtgcatacaggaggatttaaagatttt
tttttaaaacctgaattattaagagccataagtgaaagtggttttgagcatccatcagag
gtacagcaagagactattcccgcagctattacaggaaccgatattctttgtcaggccaag
agtggtatgggaaaaacagccgtttttgtgctatcgatattacaacagctagatacgaat
gagaaccaagatatgcaggatacaaaagaaatgaataatgagaacaacaataataatgga
gacaataagttcgttaggtgtcttggattagcacatactagagaattggcttatcagata
aagaatgaatttgatagatttagtaaatatttgaaaaatgtaagatgtgaagttgtatat
ggtggtatatcaatgaataagcatataaaattatttaaagaagataatattccacatata
ataataggaacaccaggaagaatattagctttgataagagagaaatatttaattacagat
aaaattcaacattttgtattagatgaatgtgataaatgtttagaaaaattagatatgaga
agtgatgttcagaaaatttttatttcaacacctttaaaaaaacaagttatgtttttttca
gctactatggctaaagaaatgagagatgtgtgtaaaaagtttttacaaaatcctgtagaa
atttttattgatgatgaagctaaattaaaattacacggattattacaacattatgttaaa
ttacaagaaaaggataaaacaagaaaacttatagaaatattagatgcattagaattcaat
caagttattatctttgttaaatcagttactagagctatcacactagataaattattaact
gaatgtaatttcccatccatagctatccatggaggtcttgaacaacaagaaagaattgaa
agatatgataaattcaaaaaatttgaaaacagaatcctagtttcaactgatttattcgga
agaggtatcgatattgaaagagttaatattgttatcaattatgatatgccagaaaattca
gactcctatttacatagagtaggacgtgcaggaagatttggaaccaaagggctagccgtt
acttttgtttcttcacaagaagatactttggcattgaatgaagtacaaacaagatttgaa
gttgccatctcagaaatgccaaataaaattgattgtaatgagtacatcaatcagtaa
DBGET
integrated database retrieval system
