Plasmodium sp. gorilla clade G2: 39740178
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Entry
39740178 CDS
T10353
Symbol
PADL01_0409100
Name
(RefSeq) replication protein A1, large subunit
KO
K07466
replication factor A1
Organism
plag Plasmodium sp. gorilla clade G2
Pathway
plag03030
DNA replication
plag03420
Nucleotide excision repair
plag03430
Mismatch repair
plag03440
Homologous recombination
plag03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
plag00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
39740178 (PADL01_0409100)
03420 Nucleotide excision repair
39740178 (PADL01_0409100)
03430 Mismatch repair
39740178 (PADL01_0409100)
03440 Homologous recombination
39740178 (PADL01_0409100)
03460 Fanconi anemia pathway
39740178 (PADL01_0409100)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
plag03000
]
39740178 (PADL01_0409100)
03032 DNA replication proteins [BR:
plag03032
]
39740178 (PADL01_0409100)
03400 DNA repair and recombination proteins [BR:
plag03400
]
39740178 (PADL01_0409100)
Transcription factors [BR:
plag03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
39740178 (PADL01_0409100)
DNA replication proteins [BR:
plag03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
39740178 (PADL01_0409100)
DNA repair and recombination proteins [BR:
plag03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
39740178 (PADL01_0409100)
MMR (mismatch excision repair)
39740178 (PADL01_0409100)
DSBR (double strand breaks repair)
HR (homologous recombination)
39740178 (PADL01_0409100)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
tRNA_anti-codon
Motif
Other DBs
NCBI-GeneID:
39740178
NCBI-ProteinID:
XP_028536732
PlasmoDB:
PADL01_0409100
LinkDB
All DBs
Position
4:complement(407940..411212)
Genome browser
AA seq
1090 aa
AA seq
DB search
MSKNEEILSKATPNFIYKFFTEPNSQESLNWLNGEINLICFSQMNAGANQTFLKVIDGSI
PPQYYAIVHLGIEENNNTISYVKKIISIENFSITNYYGKLFILAKKVTVYLNIDHFDIED
LFKKYHLQSISYFLLNSKNENNSRENYARIANESNNNNNVNSVNNNSTYSACSGSLPGYT
NRDENKSRDYYNRSNDDTNNDVNIKDNYYHNNNNNHNNNHNNHNNNHNNHNNNHNNHNNH
NNHNNHNRGENWEQLRDNYKPNEYYNNNEKTYNHNTYNRQNNEHVMKEDNNKSFMTPAHL
NDDNRIDKKTNYMDNTIDKQNRGKFVYKENPNIPNYNSNVDDYENKNDLHKSFSSQKSTN
TYNKGPSEYNRNNMCYENNSPGNESYNKNIRSHNNENNNYYYHNNNNNNNYHHNNNMNTN
PRHATHNQPYDYNNHSRDYDNKNEESSKMYMNSSCVPHATNIVKLNRCDESLHERYFSID
NNNNNMNSMNSISNNNNNNNNSVVMGHPSGSYNHESDSNNIHNNNNNSCSSKHNNYHTYD
RYMNPSNHHQNYNNKDEYTYTNNDDGHSKIRKEDIGSNQELRDYNYNENNMNIIKKDEKM
MKDKTLNRNNRKSTPYQNNAVIKMTDGILMQINKLSQYSSKWIIKARVQSKDNIRRYTSG
SKEGQVFNIELCDEDGEIKANFFGKAVDKWYDFIEVGKIYKIGKGMIKVANKKFNTLNHD
YEITLDENSLIEVLDEENENIPKYNYNFISIDNIKNMNTGSFVDIMAIVLNYQEKMQIFV
KKTGQYKDKRDVILIDESFETIPVTLWEKNACIIDEMDLRDNCIVCFKYLKIGEWQGKKL
ESHARTKIEINPSNIEKAYTLKNWWINNKKIICNSINLSSNFINIDTQKTIQEIKKDVNL
ANEDTLSGKGIMFTTYGFIDQIYNNMPVYSACPDCNKKMISNSVEENEYEPSNLLEETMY
CAKCNKNNIPVYNYYINLKITDSTDSIRASAFANCAKIIMNGLSADEYMKLRQEYILQEN
IENFDIIEKIKLNEFFFRIKVYMTSHMDELKKNYTIIDIAPVGKLLIDNCRYLIKSIKNL
TSKRDIDQEE
NT seq
3273 nt
NT seq
+upstream
nt +downstream
nt
atgagtaagaacgaagagatattatccaaggcaactcccaattttatttacaaatttttt
acagaacccaattctcaagaatcattaaattggttgaatggagaaataaatttgatatgt
tttagtcaaatgaatgcaggagcaaatcagacatttttaaaagtaatagatggatcgatt
cctccacaatattatgctatagttcatttaggaattgaagaaaataataatacaatatct
tatgtaaagaaaataattagtattgaaaacttttctataacaaattattatggcaaatta
tttatcttagcaaaaaaagttacagtatatttaaatattgatcattttgatattgaggat
ttatttaaaaaatatcatttacaaagtatatcatattttttattaaattctaaaaatgaa
aataattctagagaaaactatgctcgtattgcaaatgaaagtaacaataataataatgtt
aatagtgtcaataataatagtacctatagtgcttgtagtggcagccttccaggatataca
aacagagatgaaaataaatctagagactattataatcgttcaaatgatgacactaataat
gatgttaacataaaggataattactatcacaataataataataatcacaataataatcat
aataatcacaataataatcataataatcataataataatcataataatcacaataatcat
aataatcataataatcataataggggagaaaattgggaacaactcagagacaattataaa
cccaatgaatattataataataatgaaaaaacatataaccataatacttataacagacaa
aacaatgaacatgttatgaaagaagacaataataaaagttttatgacacctgctcatctt
aatgacgataatagaatagacaaaaaaacaaattatatggataatactatagataaacaa
aatcgaggtaaatttgtttataaagaaaatcctaatatacctaattataattcgaatgta
gatgattatgaaaataaaaatgatttacataaatctttttcatcacaaaaaagtactaat
acttataataaaggaccttctgaatataatagaaataatatgtgttatgaaaataattct
ccaggtaatgaatcttacaataaaaatattagatcccataataatgaaaataataattat
tattatcataataataataataataataattatcatcataataataatatgaatacaaat
ccgagacacgcgactcataaccagccatatgattataacaaccatagtagagattatgat
aataaaaatgaagaatcgtcaaaaatgtatatgaattctagttgtgtgcctcatgcaacg
aatattgtaaaattaaatagatgtgatgaatcattacatgagcgatatttttctatagac
aataataataataatatgaatagtatgaatagtataagtaataataataataataataat
aatagtgtggttatgggtcaccccagcggcagctacaatcatgaaagcgattcaaataac
attcataataataataataatagttgtagtagtaaacataataattatcatacatatgat
agatatatgaatccatctaaccatcatcagaattataataataaagatgaatatacatac
acaaataatgacgatggtcatagtaaaataagaaaagaagatataggaagtaaccaagaa
ttaagagattataattataatgaaaataatatgaatattataaaaaaggatgaaaaaatg
atgaaggataaaacattaaatagaaataacaggaagagtactccttatcaaaataatgcg
gttataaaaatgacagatggtatattaatgcaaataaataaactatcacaatattcttca
aaatggattattaaggctagagttcaatcaaaagataatattagaagatatacatctgga
agtaaagaaggacaagtctttaacattgaattgtgtgatgaagatggtgaaataaaagca
aatttttttggaaaggctgttgacaaatggtatgattttatagaagttggtaagatttat
aaaattggtaaaggtatgataaaagtagcaaataaaaaatttaatactttaaatcatgat
tatgaaattactttagatgagaattctttaatagaagtattagatgaagaaaatgaaaat
attccaaaatataattataattttatatctatagataatataaaaaatatgaatactggt
tcatttgtagatattatggctatagtattaaattatcaagaaaaaatgcaaatatttgtt
aaaaaaactggacaatataaagataaaagagatgtcatattaatagatgaaagttttgaa
actatacctgtaacattatgggaaaaaaatgcatgtataattgatgaaatggatttaaga
gataattgtattgtatgctttaaatatttaaaaataggtgaatggcaaggaaaaaaatta
gaatcacatgcacgtacaaaaattgaaattaatcctagcaatatagaaaaagcatatact
ctaaaaaattggtggattaataataaaaaaattatttgtaattctataaacttaagttca
aattttattaatattgatacacaaaaaactatacaagaaattaaaaaagatgtaaatcta
gcaaatgaagatacattatctggtaaaggtattatgttcactacttatggatttatagat
caaatttataataatatgccagtatattcagcatgtccagactgtaataaaaaaatgata
agtaattcagttgaagaaaatgaatatgaaccttcaaatttattagaagaaaccatgtat
tgtgcaaaatgtaataaaaataatatacctgtctataattattatattaatctaaaaatc
acagatagtactgattctataagagcttccgcatttgctaattgtgctaaaattattatg
aacggattatcagctgatgaatatatgaaactaagacaagaatatatactacaagaaaat
attgaaaactttgatattatagaaaaaatcaaattaaacgaattcttttttcgtattaaa
gtatatatgacatctcatatggatgaattgaaaaaaaattatacaatcatagatattgct
cctgttggaaaacttcttatagataactgtaggtatcttatcaaatctataaaaaatcta
acctctaaaagggatatagaccaagaagaataa
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