Plasmodium adleri: 39740301
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Entry
39740301 CDS
T10353
Symbol
PADL01_0421400
Name
(RefSeq) eukaryotic initiation factor, putative
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
plag Plasmodium adleri
Pathway
plag03013
Nucleocytoplasmic transport
plag03015
mRNA surveillance pathway
plag03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
plag00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
39740301 (PADL01_0421400)
09122 Translation
03013 Nucleocytoplasmic transport
39740301 (PADL01_0421400)
03015 mRNA surveillance pathway
39740301 (PADL01_0421400)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plag03019
]
39740301 (PADL01_0421400)
03041 Spliceosome [BR:
plag03041
]
39740301 (PADL01_0421400)
03009 Ribosome biogenesis [BR:
plag03009
]
39740301 (PADL01_0421400)
03012 Translation factors [BR:
plag03012
]
39740301 (PADL01_0421400)
Enzymes [BR:
plag01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
39740301 (PADL01_0421400)
Messenger RNA biogenesis [BR:
plag03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
39740301 (PADL01_0421400)
mRNA cycle factors
Stress granule specific factors
39740301 (PADL01_0421400)
Spliceosome [BR:
plag03041
]
Complex C
Other components
EJC/TREX
39740301 (PADL01_0421400)
Ribosome biogenesis [BR:
plag03009
]
Eukaryotic type
90S particles
Helicases
39740301 (PADL01_0421400)
Translation factors [BR:
plag03012
]
Eukaryotic type
Initiation factors
eIF-4
39740301 (PADL01_0421400)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
BATS
AAA_7
AAA_30
NAT10_TcmA_helicase
AAA_22
CMS1
PhoH
NACHT
Motif
Other DBs
NCBI-GeneID:
39740301
NCBI-ProteinID:
XP_028536844
PlasmoDB:
PADL01_0421400
LinkDB
All DBs
Position
4:<970984..>972156
Genome browser
AA seq
390 aa
AA seq
DB search
MEKDDHYKTSEKYEICTSFENIGIDEGLLRGIYAYGFEKPSAIQQRGIKPILNGRDVILQ
SQSGTGKTCVFAVGALNCVNRNLNETQVIILSPTRELAEQTQKVCLALADYIHVTIYCCI
GGKKMSDDIKALNNGVHVISGTPGRIYHMLNLRHLKCKYIKQLVIDEADEMLNKGFKEQV
YDIYRFLSPNTQIILSSATLPQEVLEITNKFMHKPVKILVKRDELTLEGIKQFFVSIEKE
QWKYETLADLYESLTITQAVVFCNTQMKVDWLTKKMLESNFTVCKMHAGMSQSERDDIML
KFRQCKFRVLISTDIWGRGLDVQEVSLVVNYDLPNSRESYIHRIGRSGRFGRKGVAINFV
KNDDIKILRDIEQYYSTQIDEMPMNITELL
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaggatgatcactataaaacttcagaaaaatatgaaatatgcacaagttttgaa
aatattggaatagatgagggtttactaagaggaatatatgcatacggttttgagaagcca
tctgctattcagcagaggggtataaagcctatattaaatggaagggatgtaattttacaa
agtcagagtggtacaggtaaaacgtgtgtgtttgcagtaggtgctttgaattgtgtaaat
aggaatttgaatgagactcaagtaataatattatctccaacaagagaattagctgagcag
actcagaaggtttgtttagcattggctgattatatccatgtgacaatttattgttgcatt
ggtggtaaaaaaatgagtgatgatataaaagctttaaataatggagtacatgtaataagt
ggaacccctggtcgtatttatcatatgttaaatttaagacatttaaaatgtaaatatata
aaacagttagtaatagatgaagcagatgaaatgttaaacaaaggatttaaagaacaggta
tatgatatctatcgttttttatcacctaatactcaaataatattatcatctgcaacattg
cctcaagaagtgttagaaataacaaataaatttatgcacaagccagtaaaaatattagtt
aaaagagatgaattaactttggaaggaattaagcaattttttgtatctatagaaaaagag
caatggaaatatgagacattggcagatttatatgagagtttaacaataactcaagcagta
gttttttgtaatacacaaatgaaagtggattggctaaccaaaaagatgttggaatcgaat
tttactgtatgtaaaatgcatgcaggaatgagtcaaagtgaaagagatgatattatgttg
aaatttaggcaatgtaaatttcgtgtattaatatctacagatatatggggaagaggttta
gatgtacaagaggtttcacttgttgtcaattatgatttaccaaattcaagagaaagttat
attcatagaattggtaggagtggaagatttggaagaaaaggagtggctattaattttgta
aaaaatgatgatataaaaattcttagagacattgaacaatattactcaacacaaattgat
gaaatgccaatgaatataacggagttattataa
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