Plasmodium sp. gorilla clade G2: 39740508
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Entry
39740508 CDS
T10353
Symbol
PADL01_0519300
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm2, putative
KO
K12621
U6 snRNA-associated Sm-like protein LSm2
Organism
plag Plasmodium sp. gorilla clade G2
Pathway
plag03018
RNA degradation
plag03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
plag00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
39740508 (PADL01_0519300)
09123 Folding, sorting and degradation
03018 RNA degradation
39740508 (PADL01_0519300)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plag03019
]
39740508 (PADL01_0519300)
03041 Spliceosome [BR:
plag03041
]
39740508 (PADL01_0519300)
Messenger RNA biogenesis [BR:
plag03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
39740508 (PADL01_0519300)
mRNA degradation factors
5'-3' decay
Lsm complex
39740508 (PADL01_0519300)
Spliceosome [BR:
plag03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
39740508 (PADL01_0519300)
Complex C
U2 snRNP components
39740508 (PADL01_0519300)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
Hfq
Motif
Other DBs
NCBI-GeneID:
39740508
NCBI-ProteinID:
XP_028537047
PlasmoDB:
PADL01_0519300
UniProt:
A0A2P9BT87
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All DBs
Position
5:742442..743098
Genome browser
AA seq
103 aa
AA seq
DB search
MLFFTFFQQLAEKNHHVTVELKNDLQISGVLHSVDQYLNIKLTNVSVNNPEKYPHLLSIK
SCFVRGSVVRYVFLPSNEIDVQKLHHMCRQEAKMVAEKEKERK
NT seq
312 nt
NT seq
+upstream
nt +downstream
nt
atgctcttttttacattttttcaacaactagctgagaaaaatcatcatgttactgtcgaa
ttaaaaaatgatttacaaatatcaggagtcttgcattcagttgatcaatatttaaatata
aaattaacgaatgtgtcagtaaataatccggagaaatatcctcatttgttatctataaaa
tcatgttttgttagaggatctgtagttagatatgtattcctaccttcaaatgagattgat
gttcaaaagttacatcatatgtgtagacaagaggcaaaaatggtagccgagaaagaaaaa
gaaaggaaataa
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