Plasmodium sp. gorilla clade G2: 39741106
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Entry
39741106 CDS
T10353
Symbol
PADL01_0718000
Name
(RefSeq) exosome complex component CSL4, putative
KO
K07573
exosome complex component CSL4
Organism
plag Plasmodium sp. gorilla clade G2
Pathway
plag03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
plag00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
39741106 (PADL01_0718000)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plag03019
]
39741106 (PADL01_0718000)
Messenger RNA biogenesis [BR:
plag03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
39741106 (PADL01_0718000)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
39741106 (PADL01_0718000)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ECR1_N
EXOSC1
ECR1_N_2
Motif
Other DBs
NCBI-GeneID:
39741106
NCBI-ProteinID:
XP_028537615
PlasmoDB:
PADL01_0718000
LinkDB
All DBs
Position
7:<784170..>784889
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AA seq
195 aa
AA seq
DB search
MSYEDDDIVIPGELLGSQNEYIINGQNTYLLKHEIRSSILGKKIINKNNDNKTIISVYNL
NPASLSLPKIGDIVICKIHRVSFHMIYCYILSSHNIYTKNALKGFILKSDIHINEGELGD
NFLCFQQGDIIKAKVLSIGQYSSYKLSTVGSDLGVIAAFNKKGEILRPVAWNLVLNINDM
TFERRKASNDFSLLL
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
atgagttatgaagatgatgatattgtaataccaggagagttattaggctctcaaaatgaa
tatataataaatggtcaaaatacatatttattgaaacatgaaataagatctagtatcctt
ggtaaaaaaattataaataaaaataatgacaataaaacaattataagtgtttataatctg
aatccagcttctttatctcttccaaaaataggagatatagttatatgtaaaattcatcgt
gtatcattccatatgatatattgttatattctatcatcacataatatatatacaaaaaac
gcattaaaaggatttattttaaaaagtgatatacatataaatgaaggagaattaggtgat
aatttcttatgttttcaacaaggagatataataaaagctaaagttctatctataggtcaa
tactcatcttataaattgtcaacagttggatcggatcttggagtcatagcagcatttaat
aaaaagggtgaaatattaagaccagtggcttggaacctcgtattaaacataaatgacatg
acctttgaaagaagaaaagcttcaaacgatttttctctccttctttaa
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