Plasmodium sp. gorilla clade G2: 39743275
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Entry
39743275 CDS
T10353
Symbol
PADL01_1302900
Name
(RefSeq) DNA ligase I
KO
K10747
DNA ligase 1 [EC:
6.5.1.1
6.5.1.6
6.5.1.7
]
Organism
plag Plasmodium sp. gorilla clade G2
Pathway
plag03030
DNA replication
plag03410
Base excision repair
plag03420
Nucleotide excision repair
plag03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
plag00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
39743275 (PADL01_1302900)
03410 Base excision repair
39743275 (PADL01_1302900)
03420 Nucleotide excision repair
39743275 (PADL01_1302900)
03430 Mismatch repair
39743275 (PADL01_1302900)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
plag03032
]
39743275 (PADL01_1302900)
03400 DNA repair and recombination proteins [BR:
plag03400
]
39743275 (PADL01_1302900)
Enzymes [BR:
plag01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
39743275 (PADL01_1302900)
6.5.1.6 DNA ligase (ATP or NAD+)
39743275 (PADL01_1302900)
6.5.1.7 DNA ligase (ATP, ADP or GTP)
39743275 (PADL01_1302900)
DNA replication proteins [BR:
plag03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
39743275 (PADL01_1302900)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
39743275 (PADL01_1302900)
DNA repair and recombination proteins [BR:
plag03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
39743275 (PADL01_1302900)
NER (nucleotide excision repair)
Other NER factors
39743275 (PADL01_1302900)
MMR (mismatch excision repair)
Other MMR factors
39743275 (PADL01_1302900)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_A_C
ABC2_membrane_3
Myosin_N
ICE2
Motif
Other DBs
NCBI-GeneID:
39743275
NCBI-ProteinID:
XP_028539719
PlasmoDB:
PADL01_1302900
LinkDB
All DBs
Position
13:complement(<147799..>150776)
Genome browser
AA seq
941 aa
AA seq
DB search
MNLLILVLLIKMVVCKIINYVRTDYNFMMSFLRTRKIFSHKKIYFNFKVSKNFTNNSSPN
SYSDILKCFSFPKKGSKDETKQNEAFEKAEIKEEEKDSNVKRKMTSESNKNKRAKIKNES
DVVKKGSLFNCVVREDEKVNDLSSPKFNPVHFNINDLYLSDKDKEKHKFKDSLLFTFLTN
AFNQIEELKGSGTGSKKNVSIILSNIFRVLIYYSPNDLIPAVYITLNKVAPDYLNVEAGV
GEALILKTMSEAYSRTESSIKKDLQQIEDLGIIAENCSCKMRTIFPLPRLTIQSVFNELK
SIPNLIGSNSQQKKRDVIKKLLVSAKTSEAKYIVRFLQQRLRIGVNSATVVQALSYAFIL
TRPSIPDDIIKRGKLINENLINGNLCHTDEFEGISNPKKDESLTRSCDRNNMEGYIKGRN
DDININDNIKKEQNICDNINICDNINKEQNIYDNIKKEENICDNMDSLINQIRMRNEKIN
KPNIFYNIEKVGDTRLIPTFFKELKKIYCEENNDVDIFECMEKSVKGALCELPNIEIIIQ
NLLNGDDMNTLNKKCTVKTGIPVQPMLAKPTKGVQEVLDRFNNVTFTCEYKYDGERAQIH
YIDKDNIKIFSRNLETMTEKYPDVIQIIKDQIVENAKECIIDSEVVAYDIVNKKILPFQV
LTTRKRKDVDIENIKVKVCLFPFDLICCNGVPVIKEPLAVRRKLLYSLLKSKDGVLSYAT
HSEMNNSEDIDIFLQDAIENNCEGLMVKTLIDNASYEPSRRSLNWLKVKKDYVEGLSDSV
DLVPIAGYYGKGKRSGVYGAFVLAAYNSETENFQTVCKAGTGFSDEILGSLYESLSDKII
PNKKSYYEVSDKLNPDVWFDAHYVWEVKAADLSLSPVHTAAIGIYADDKGIGLRFPRFLR
LREDKNAEQATTTQQIVDFYEAQFSNNKNKNIDYNDDTESE
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atgaatttactaatattagttttattaattaaaatggttgtatgtaaaattattaattat
gtgagaactgattataattttatgatgtcatttttaaggacgcgaaaaatatttagtcat
aaaaaaatatattttaattttaaagtttctaagaattttacaaataattcatcacctaat
agttatagtgatatattaaaatgcttctcatttccaaaaaaagggtcaaaggatgagacg
aaacaaaatgaagcatttgaaaaagcagaaataaaagaagaagaaaaagatagtaatgtg
aaaaggaaaatgactagcgaaagtaacaaaaataaaagagctaaaataaaaaacgaaagt
gatgttgtaaagaaaggctcgttattcaattgtgttgtaagagaagatgaaaaagtaaat
gatttaagctcacctaaatttaatcctgtacattttaatataaatgatttatatttatct
gataaagataaagaaaaacataaatttaaagactcgttattatttacatttttaacaaat
gcatttaatcaaatagaagaattaaaaggtagtggaacaggaagtaaaaaaaatgtatct
attatattatctaatatatttagggttttaatatattatagtcctaatgatttaattcca
gctgtatatataacattaaataaagtagctccagattatttaaatgttgaggctggtgta
ggtgaagccttgatattaaaaacgatgtctgaggcttacagtcgaaccgagagtagtata
aaaaaggatttacaacagattgaagatttaggaataatagctgagaattgttcatgtaag
atgagaactatatttcctttacctcgtttaactattcaatctgtttttaatgaattaaag
agtattcctaatcttattggatctaactcacaacaaaagaaaagagatgtaataaagaaa
ttgttagtaagtgctaaaacatctgaggctaaatatatcgtaagattcttacaacaacgt
ttaagaataggagtaaattctgcaacggttgttcaagcattgtcttatgcttttatattg
acaagacctagtatacctgatgatataattaagagaggcaaattaattaacgagaattta
attaatggtaatttatgccatactgatgaatttgaaggtatttctaatccgaagaaggat
gagtctttaacacgatcatgtgatagaaacaatatggaaggatatataaaaggtaggaat
gatgatataaatataaatgataatataaaaaaggaacaaaatatttgtgataatataaat
atttgtgataatataaataaggaacaaaatatttatgataatataaaaaaggaagaaaat
atttgtgataatatggattcattaattaatcagatacgtatgagaaatgaaaaaatcaac
aaaccgaatattttttataacattgaaaaggtaggtgatactagacttataccaacattt
tttaaagaattaaaaaagatatattgtgaagaaaataatgatgttgatatatttgaatgt
atggaaaaatcagttaagggtgctttatgtgaattaccaaatattgaaataataattcaa
aatttattaaatggtgatgatatgaatacattaaataaaaaatgtactgtcaagacagga
attccagtgcaaccaatgttagcgaaaccaactaaaggtgttcaagaagtgttagataga
tttaataatgttacatttacatgtgaatataaatatgatggagaacgagcacaaatacat
tatatagataaggataatataaaaatatttagtcgaaatttagaaactatgactgagaaa
tatccagatgttatacaaattattaaagatcaaattgttgagaatgcaaaggaatgtatt
attgatagtgaagttgttgcttatgatattgttaataagaaaatattaccattccaagta
ttaacaactagaaaaagaaaagatgtagatatagaaaatattaaagtcaaagtatgtctt
tttccttttgatttaatctgttgtaatggtgtaccagtaattaaagaacctttagctgtt
agaaggaaattattatattctttattaaaatcaaaagatggtgtgttatcatatgctaca
cattctgaaatgaataatagtgaagatattgatatctttttacaagatgctatagaaaat
aattgtgaaggtttaatggttaaaactttaatagacaatgcatcatatgaaccatcgagg
agatcattaaactggttaaaagttaaaaaagattatgttgaaggtctttcagattcagtt
gatttagttcctattgctggttattatggaaaaggtaaaagaagtggtgtatatggagct
tttgttctagcagcttataattctgagactgaaaattttcaaacagtttgtaaagcaggt
acaggttttagtgatgaaatattaggatcattatatgaatcattaagtgataaaataata
ccaaataaaaaatcatattatgaagtatctgataaattaaatcctgatgtatggtttgat
gctcactatgtatgggaagttaaagcagcagatttatctttatcaccagtacatacagct
gctattggtatatatgctgatgataaaggtattggtttaaggttcccgagatttttacga
ttaagagaagataaaaatgcagaacaagcaacaactacacagcaaattgtcgatttttat
gaggctcaatttagtaataataaaaataaaaatattgattataatgatgatacagagagt
gaataa
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