Plasmodium adleri: 39743385
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Entry
39743385 CDS
T10353
Symbol
PADL01_1313800
Name
(RefSeq) TFIIH basal transcription factor subunit, putative
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
plag Plasmodium adleri
Pathway
plag03022
Basal transcription factors
plag03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
plag00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
39743385 (PADL01_1313800)
09124 Replication and repair
03420 Nucleotide excision repair
39743385 (PADL01_1313800)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
plag03021
]
39743385 (PADL01_1313800)
03400 DNA repair and recombination proteins [BR:
plag03400
]
39743385 (PADL01_1313800)
Transcription machinery [BR:
plag03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
39743385 (PADL01_1313800)
DNA repair and recombination proteins [BR:
plag03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
39743385 (PADL01_1313800)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
VWA_2
C1_4
VWA
Tfb4
C1_2
Motif
Other DBs
NCBI-GeneID:
39743385
NCBI-ProteinID:
XP_028539827
PlasmoDB:
PADL01_1313800
LinkDB
All DBs
Position
13:<547844..>549922
Genome browser
AA seq
401 aa
AA seq
DB search
MQNPQNSENKVIFVEDVVRDFDENEIFEEITGKFTWEQDVERSWNLLVENNGVLQHVSQE
NDENENKEKYKKNQGSSLRKGIFRHIIILFDMSSSMKERDLKPDRINVALECVESFLKNF
FFKNPVGHVGVVALKNSSAKLIQPFTSNVDDILNSILKERTAGLQGSPSLEEGLQIAHDL
LIDMPLYGTKEVLIMYGSIRTCDKKNILNVLELLVKSNIYVNCISIAPEMYILKHICEKS
NGFYKICTSKNSLMNEINNNAETPLWMQGMEPQLIHICFPTKKKISTQIMCSCHGKLNTD
TYVCNFCNSYTCKIPSKCKVCGIHLISMHDLSHITNNLQGSPLFIEIKNEQGIYKVCSSC
NQQLYNKIYQCTKCQYIFCLECDIFIHEELNQCPFCLINDT
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaatcctcaaaatagtgaaaataaagtcatttttgttgaagatgttgtaagagat
tttgacgaaaatgaaatttttgaagagataactgggaaatttacatgggaacaagatgtt
gaacgatcatggaatttgctggtagaaaataatggtgtgctacaacatgttagccaagag
aatgacgaaaatgaaaataaagagaaatataaaaagaaccaaggatcttctttaaggaaa
ggaatatttagacacataatcatactatttgacatgtctagtagtatgaaagaaagggat
ttaaaaccagataggataaatgtagctttagaatgtgtggaatcatttctaaaaaacttt
ttcttcaagaatcctgttggacatgttggtgtagtagctttaaagaatagttcagctaaa
ttaatacaaccatttacatcaaatgtagatgatatattaaattccatattaaaggaaaga
acagcaggtcttcaaggttcaccttcattggaagaaggattacagatagcacatgattta
ttaatcgatatgccattatatggtacaaaagaggttttaataatgtatggatctataaga
acatgtgataagaaaaacattttaaatgtattagaattattagtaaaaagtaatatatat
gtaaattgcatttcaatagctccagaaatgtatatattaaagcatatttgtgaaaaatct
aatggtttttataaaatatgtacaagtaaaaattctttaatgaatgaaataaataataat
gctgaaacacctttatggatgcaaggtatggaacctcaattaattcatatatgttttcca
acaaagaaaaaaatcagtacacaaataatgtgttcatgtcatgggaaattaaatactgat
acatatgtatgtaatttttgtaatagttatacatgcaaaataccatccaaatgtaaagta
tgtggtatacatttaatatcaatgcacgatctttcacatattacaaataatcttcaaggt
tcccctttattcatagaaataaaaaatgaacaaggaatatataaagtatgttcatcatgt
aatcaacaattgtataacaaaatataccaatgtacaaaatgtcaatatattttttgtctt
gaatgtgatatttttatacatgaagaattaaatcaatgtcccttctgtttaattaatgat
acataa
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