Plasmodium adleri: 39743486
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Entry
39743486 CDS
T10353
Symbol
PADL01_1323900
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm6, putative
KO
K12625
U6 snRNA-associated Sm-like protein LSm6
Organism
plag Plasmodium adleri
Pathway
plag03018
RNA degradation
plag03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
plag00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
39743486 (PADL01_1323900)
09123 Folding, sorting and degradation
03018 RNA degradation
39743486 (PADL01_1323900)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plag03019
]
39743486 (PADL01_1323900)
03041 Spliceosome [BR:
plag03041
]
39743486 (PADL01_1323900)
Messenger RNA biogenesis [BR:
plag03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
39743486 (PADL01_1323900)
mRNA degradation factors
5'-3' decay
Lsm complex
39743486 (PADL01_1323900)
Spliceosome [BR:
plag03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
39743486 (PADL01_1323900)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
39743486
NCBI-ProteinID:
XP_028539928
PlasmoDB:
PADL01_1323900
LinkDB
All DBs
Position
13:complement(<946050..>946283)
Genome browser
AA seq
77 aa
AA seq
DB search
MSANSPKDFVESLKGRAVIVRLNNGTDYKGILACLDERMNVALEQTEEYCEGELTEKYND
AFIRGNNVFYIRAIEEE
NT seq
234 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcaaattctccaaaagattttgtggaaagtttaaaaggtcgagcagtaattgtt
agattgaataatggtacggactataagggaatccttgcttgtttagatgaacgtatgaac
gtggctctagaacaaactgaagaatattgtgaaggtgaattaacagaaaaatacaatgat
gcttttataagaggaaataatgtattttatataagagccattgaagaagaatga
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