Plasmodium sp. gorilla clade G2: 39744370
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Entry
39744370 CDS
T10353
Symbol
PADL01_1443300
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm5, putative
KO
K12624
U6 snRNA-associated Sm-like protein LSm5
Organism
plag Plasmodium sp. gorilla clade G2
Pathway
plag03018
RNA degradation
plag03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
plag00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
39744370 (PADL01_1443300)
09123 Folding, sorting and degradation
03018 RNA degradation
39744370 (PADL01_1443300)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plag03019
]
39744370 (PADL01_1443300)
03041 Spliceosome [BR:
plag03041
]
39744370 (PADL01_1443300)
Messenger RNA biogenesis [BR:
plag03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
39744370 (PADL01_1443300)
mRNA degradation factors
5'-3' decay
Lsm complex
39744370 (PADL01_1443300)
Spliceosome [BR:
plag03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
39744370 (PADL01_1443300)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
LSM12_LSM
Motif
Other DBs
NCBI-GeneID:
39744370
NCBI-ProteinID:
XP_028540765
PlasmoDB:
PADL01_1443300
LinkDB
All DBs
Position
14:<1679573..>1680202
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AA seq
101 aa
AA seq
DB search
MATISGSETFLPLALMDKCIGSKIWIMMKGDKEIVGKLVGFDEYVNMVLEDVTEYTYANN
IKKVNKIKKLLLNGLNITIMVPGGTPVNYYDYEEKLEENIA
NT seq
306 nt
NT seq
+upstream
nt +downstream
nt
atggctacaattagtgggtcagaaacatttttacccttggctttaatggataagtgtatt
ggaagtaaaatatggataatgatgaaaggtgataaagaaattgtaggtaaattggttggc
ttcgatgaatatgtaaatatggtattagaagatgttacagaatacacgtacgcaaataat
attaaaaaagtaaataaaataaaaaaattattattaaatggattaaatataactattatg
gttccaggaggaactccagtgaattattatgattatgaagaaaagttagaagaaaatata
gcataa
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