Poecilia latipinna (sailfin molly): 106934720
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Entry
106934720 CDS
T08005
Symbol
col4a2
Name
(RefSeq) collagen alpha-2(IV) chain
KO
K06237
collagen type IV alpha
Organism
plai
Poecilia latipinna (sailfin molly)
Pathway
plai04510
Focal adhesion
plai04512
ECM-receptor interaction
plai04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
plai00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
106934720 (col4a2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
106934720 (col4a2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
106934720 (col4a2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
plai04147
]
106934720 (col4a2)
00536 Glycosaminoglycan binding proteins [BR:
plai00536
]
106934720 (col4a2)
Exosome [BR:
plai04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
106934720 (col4a2)
Glycosaminoglycan binding proteins [BR:
plai00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
106934720 (col4a2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
106934720
NCBI-ProteinID:
XP_014870293
LinkDB
All DBs
Position
Unknown
AA seq
1653 aa
AA seq
DB search
MAVQQKEVFVLFNVVFGGKKHSGPCGGRDCSGGCKCFPEKGARGLPGPLGPQGSQGPQGR
PGDPGIQGHKGQKGDQGTGGFIGPKGSTGMTGVPGFSGSDGIPGHPGQAGSRGKPGADGC
NGTKGEPGFPGLPGFLGGPGNPGLKGRKGAKGDSLDVTIYIERFRGDPGRPGEDGFPGPP
GPQGREGSRGPIGPKGPPGPPGPRGPKGTMTKVLKGVKGEMGDIGPQGPPGNYTTQQRQP
ITGPSGLPGDKGERGDLADNLDGKGETGIMGMPGPRGESGADGPPGRKGEPGYPGLNGRD
GPKGGRGDPGELISSGFPWSVGGLPGPRGETGPDGERGPIGDKGLPGPPGLPASDTQQQS
LDFFDLFGEKGAQGDKGLPGDQGRPAVFPGPKGSDGSPGSRGPPGPRGSWKEFFKGEQGP
RGRPGNAGAKGFKGELGECQCSSENFLRGLPGPAGERGDPGMTGEFGYEGDMGDQGPRGA
DGFPGSAGLDGFPGPKGRKGETTVAREKGSPGEPGDPGIDGVVGLHGSPGPNGLHGLPGN
RGPPGEGPRGERGDKGFPGWPGRPGSRGEAGTPGESVVGIKGQHGPPGDDGLTGYDGVQG
TPGSPGGCIPDGAGGQVDVTGDCEPIPGPPGQPGPPGISGISGSPGVPGPKGFSGVEGVN
GEKGEQGERGRGGTPGPRGFPGPRGDLGTPGTKGSLGNPGVPGMPGRYGSQGEKGAHGEV
MGASPGPPGDPGLPGLRGQKGQLGDQGQPGISGIDGMPGMIGFRGLKGAPGLPGEEGRPG
PAGTYGFPGDPGRSGPPGPAGTTGEPGRTGERGPGGDPGPPGPIGLKGMPGAYGDDGGIG
ERGPPGDPGEPGATGRPGLQGLKGTKGSHGTYGFEGVTGNPGLKGYEGLKGGPGTPGEVG
LKGLAGAKGERGEQGLQGKPGVMSPKMLIHIKGAKGEHGHQGSPGFTGPRGTKGDQGVPG
YDGAHGLPGDPSDEKGVHGDPGAQGLPGIKGMPGTPGSRGIQGFDGMHGDKGGKGSPGAF
GHTGVQGKKGGKGDKGIQVDLPGSPGLRGEDGFAGEPGLKGLPGPIGDRGITGFDGIKGV
KGEAGDLGIEGFPGLDGQRGTPGNQGQKGFPGIPGKDGIPGVPGFSGNKGYPGLPGLYGL
HGLKGQKGVSGTPGLDIVGPAGETGVKGRKGESGIPNSQPGSPGPSGLKGFQGNLGDYGQ
PGLPGLRGLQGPSGTPDIAGKRGDPGFPGPRGSQGYPGASGPPGLDAFPGEKGVPGENGF
PGPTGTRGSRGDSGPAGYRGPDGISGKKGPKGDQGHMGIPGQTGLQGERGPVGPKGDTGL
PGFPGARGSQGGLPPSIIIPGERGLPGPRGIPGPKGISGGPGPRGPPGDPGFMGPVGLKG
MPGIGGTPGVPGYRGEVGNVGHPGLQGMEGQRGRPGGPGLPGMAGRSISVGYLLVKHSQS
DQTPMCPVGMSKLWDGYSLLYLEGQEKAHNQDLGLAGSCLPRFSTMPFLYCNPGDICYYA
SRNDKSYWLSTTAPLPMMPVEEKGIQPYISRCSVCEAPSVAIAVHSQDITIPQCPVGWRS
LWIGYSFLMHTAAGNEGGGQSLSSPGSCLEDFRTTPFIECNGAKGTCHYFANKHSFWLTS
IDQSFHTQPSSETLKAGQLLSRISRCQVCMKNL
NT seq
4962 nt
NT seq
+upstream
nt +downstream
nt
atggctgtgcagcaaaaagaggtttttgtgctcttcaatgtggtctttggtgggaagaag
cacagtggcccgtgtgggggaagagactgcagcggtggctgtaaatgctttccagagaag
ggtgccaggggtcttccagggcctcttggtcctcagggctcacaggggccccaagggcga
ccaggggatcctggtattcaaggacacaagggacagaaaggtgaccaaggaactggtggc
ttcataggcccaaaaggcagcacgggaatgaccggtgtacctgggttctctggaagcgac
ggcatccctggccacccaggacaagctgggtccagagggaagccaggagctgacggctgt
aacgggaccaaaggagaacctggattcccaggattacctggttttctcgggggccctgga
aatcccggtctaaaaggcaggaagggagcgaaaggggactctctggatgtcaccatttac
atagagcgctttaggggagatccagggagaccaggagaggacggatttccggggcctcca
ggaccacaagggcgggaaggtagcagaggccctataggacccaagggtcctccaggtcct
ccagggccacgtggaccaaagggcaccatgaccaaagtgttgaagggagtcaaaggagaa
atgggggacatcggaccacagggcccaccaggaaactacaccactcagcaacgtcagcct
atcactggaccttctggattaccaggtgacaaaggagaaagaggagatctggcagacaac
ttagacggcaaaggagaaactggtataatgggaatgcctggccctcggggcgaaagtggt
gcggatggacctccgggtcgaaagggcgagcccggttatccggggctgaacggcagagac
ggacctaagggaggcagaggtgatccaggggagctgatttcatcaggatttccctggtct
gtgggtggccttcctgggccccgtggtgagacgggtccagatggagagaggggtccgatc
ggagacaaaggcttgcccggaccacctggacttcctgcctctgacacacagcaacaatct
ttggatttcttcgacctttttggtgaaaagggggcacaaggagacaagggtctaccagga
gaccaaggaagacctgccgtctttccgggacccaaaggatctgatggaagtccggggagc
agaggcccaccgggacccagaggatcgtggaaagagttctttaaaggagagcaagggccg
aggggaagacctggcaatgcaggggctaaaggatttaaaggggaacttggagaatgtcag
tgcagtagtgaaaatttcctccgcggcttacctggtcctgccggtgagcgcggagatcct
gggatgaccggagagttcggatacgaaggggacatgggagaccagggtccccgaggcgcc
gacgggtttcctggatctgctggcctcgatggttttccagggcccaaaggacgaaaagga
gaaacaactgttgcgagagaaaaaggatcccctggagagcctggagacccgggaattgat
ggagtggtaggattacacggttcgccaggcccaaatggtctccatggtctccctggtaac
cgcggtcctccaggcgaaggacccaggggagagcgtggagacaaagggttccccggatgg
cccggtagacccggttctcgtggggaggcgggaacgccaggtgaaagcgttgtaggtatc
aaaggacagcatggcccacccggtgatgacggcctcacaggctatgatggagttcaggga
acgcctggaagtccgggcggctgcataccagatggagctggaggacaggtggatgtgaca
ggtgattgtgaacctatcccaggtcctcctggtcagcctggacctcctggaatcagtgga
atatcaggttctccaggagttcctggcccaaaaggtttctctggtgtggaaggagtcaat
ggagagaaaggagaacaaggagagcgtggcagaggcggcactcctggaccacgaggtttt
cctggtccccgtggagacttggggactcctggcactaaaggctctttagggaatcccggt
gttccgggcatgcctggccgatacggatctcaaggggaaaaaggtgctcacggagaagta
atgggagcatcgcctggccctccaggcgacccaggactacctggcctgcgagggcaaaag
ggccaacttggagatcaagggcagccagggatttcaggaatcgacgggatgcctggcatg
atcggcttcaggggactgaaaggcgccccaggcctgccaggggaagagggaagacctggg
ccagctgggacgtacggtttccccggggatcctggcaggtcgggcccacctggtccggca
gggacaactggagagccaggaagaactggagagagaggaccaggaggtgacccaggtcct
ccaggtccaataggattaaaaggaatgccaggtgcttatggagatgatggtgggatcgga
gagcgcggcccgccaggtgaccctggagaaccaggtgcaactggacgaccaggccttcaa
ggactcaaaggaacaaaaggtagtcatggaacgtatggttttgagggagtcacaggaaat
cctggtctgaagggctatgagggactaaaaggggggcctggaacacctggagaagttggc
ctgaaaggactggcaggtgcaaagggagagagaggcgaacaaggtctgcaaggtaaaccg
ggggtaatgtcgccgaaaatgcttatccacataaagggggccaaaggagagcacggacac
cagggcagtccaggttttaccggaccaagaggtaccaaaggtgaccaaggtgtgccgggc
tacgatggagctcacggtcttccaggggaccccagcgatgaaaaaggagttcatggggat
ccaggtgcacagggcctgccaggcattaagggaatgccagggacacctggaagcagaggc
atccaaggctttgacggaatgcatggtgacaaggggggcaaaggaagccctggtgccttc
ggtcatacaggagtgcaaggaaagaaaggaggaaaaggtgacaagggcattcaagtggac
cttccaggatctccaggattgagaggagaggatggatttgcaggagaaccaggtctgaaa
ggtctacctggaccaatcggggaccgtggcataaccggatttgacggtattaaaggggta
aagggagaagccggggatctgggaatagaaggattcccagggttggatgggcagagagga
actccggggaaccaaggtcaaaagggttttcctggaattcctgggaaagatgggatacca
ggcgttcctggcttctccggaaataaaggttaccccggcctaccgggtctttatggatta
catggactgaaaggacagaagggtgtctcaggaacgccaggtctggacattgttggacct
gctggagaaactggagttaaaggaaggaaaggagaaagcggtattcccaacagccagcca
ggttctccaggtccatcaggactgaaaggcttccagggaaatctgggtgactatggccaa
cctggactgccaggattacgtggccttcagggaccaagtgggaccccagacatagcggga
aagaggggggatcctggcttcccaggacctcgaggatcccaaggttatcccggagcaagc
ggaccgcctggactggatgctttcccaggagagaaaggcgtaccaggcgaaaatgggttc
cccggccccactggtacgagaggatctcgaggagattcaggtccagcaggctacaggggc
cctgatggaatctctgggaagaaaggaccaaagggagaccaaggtcacatgggaattcct
ggacagactggcttacagggagagagaggaccagtgggcccgaaaggagacactggattg
ccaggttttcctggagcgcgtggcagccagggcggtcttccaccttccattataatccca
ggagaaagaggccttccaggaccgcggggtatcccaggcccgaaagggatttcagggggg
ccaggacctcgaggcccacctggagacccagggttcatgggacctgttggacttaaaggc
atgcctgggattggtggtactccaggagtgccaggttaccgtggcgaggtgggcaatgtg
gggcaccctggtcttcaaggcatggaaggacaaagaggcaggcccggcggcccaggatta
cctggcatggcgggccgcagtatcagcgtgggctacctgctggtgaaacacagtcagtca
gaccagacgccaatgtgtccggtgggaatgtctaaactgtgggacggttacagtctgctg
tacctggagggccaagagaaggcccacaaccaggaccttggtttggctggttcctgtctc
ccacggttcagcaccatgccctttctgtactgcaaccctggggacatttgctactacgcc
agcagaaacgataagtcctactggctgtcaaccactgctcccctccccatgatgcctgtg
gaagaaaaaggaatccagccatacatcagccgttgctcagtttgcgaggctccatcagtt
gctattgcagttcacagtcaggacatcaccatcccacagtgtcccgtgggctggaggagc
ctgtggattggctactccttccttatgcatacggcagcgggaaacgaaggcggcggtcag
tccctgtcatcgcccggctcctgcctggaggacttccgcacaacacctttcattgagtgt
aacggagccaagggcacatgccactactttgctaacaagcacagcttctggctgacatcc
atagaccagtcgttccatactcagccgtcatcggagacgctaaaggcgggccagctcctc
tcacgcatcagccgctgtcaggtctgcatgaagaacctgtga
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integrated database retrieval system
