Poecilia latipinna (sailfin molly): 106935350
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Entry
106935350 CDS
T08005
Symbol
clp1
Name
(RefSeq) polyribonucleotide 5'-hydroxyl-kinase Clp1
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
plai
Poecilia latipinna (sailfin molly)
Pathway
plai03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
plai00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
106935350 (clp1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plai03019
]
106935350 (clp1)
Enzymes [BR:
plai01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
106935350 (clp1)
Messenger RNA biogenesis [BR:
plai03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
106935350 (clp1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLP1_P
Clp1
CLP1_N
TniB
ATP_bind_1
MMR_HSR1
AAA_22
nSTAND3
AAA_16
CbiA
Motif
Other DBs
NCBI-GeneID:
106935350
NCBI-ProteinID:
XP_014871267
Ensembl:
ENSPLAG00000022388
UniProt:
A0A3B3VYJ5
LinkDB
All DBs
Position
Unknown
AA seq
441 aa
AA seq
DB search
MAAEGVEKTSEDASSSGKVSKRFDLEKETELRFEVEAGEAADQVEMELLTGMAEVFGSEL
NRNKKYTFGPGSKIAVFTWQGCSVNLYGKPEVAYVSKDTPMLLYLNTHAALEQMRKQAER
ENERGPRVMVVGPTDVGKSTVCRMLLSYAVRVGRRPTLVELDVGQSGVSVPGTVSALCIE
RPADVEEGFSVQAPLVYHFGSTTPGTNIKLYNKLTSCLAEVFSQRCEVNRKASVGGCIIN
TCGWVKGSGYQALVHCASTFQVDVVLVLDHERLYNELKRDLPHFVRVVLLPKSGGVVERS
KECRRETRDEKIREYFYGFRGLSFFPFSFEVRFSDVRIYKIGAPSIPDSCLPLGMSQDDT
QLKLVPVTPGRDLTYHVLSVSSVDDGDEDARKSIVESPVCGFIVVTNVDTQAQVMKVLSP
APRPLPRHTLLIMDIRFMDMK
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atggcagcagagggtgtggaaaagaccagcgaagatgcatcgtcttcggggaaggtgtcc
aaaaggttcgacctggagaaggagaccgagcttcgcttcgaggtggaggccggagaggcc
gcggatcaggtggagatggagctcctgacggggatggctgaggtgtttggctctgagctg
aaccgcaacaagaagtacaccttcggaccaggctccaagatcgcagttttcacttggcag
ggctgcagtgtgaatctgtatggaaagccagaggtggcctatgtgtccaaggatactcct
atgctgctctacctgaacacccatgctgccctggaacagatgaggaaacaagctgagcgg
gaaaatgagagggggcccagggtgatggtagtgggacctacagacgtggggaagtccaca
gtgtgccgaatgcttctcagctatgctgtgagagttggaaggagacctacgctggtggaa
ctggatgttggacagagtggggtttctgttccagggacagtatcagctctgtgcatcgag
cgtcctgcagacgtggaggagggcttctctgtccaggctcctttagtttatcactttggt
tctacgactcctggaaccaacatcaaactttacaacaagctgacatcgtgcctggccgag
gtgttctctcaacgctgtgaggtaaacaggaaggccagcgttggcggctgcatcatcaac
acctgtggctgggtgaagggttctgggtaccaggccctggtccactgtgcctccaccttc
caggtggacgtggtgctcgtgctggaccatgagaggctctacaatgaactcaaaagggac
ctgccgcactttgtgcgcgttgtgctgctgccgaagtccggaggagtggtggagcgctcc
aaggagtgccggcgggagactcgggatgaaaagatccgcgagtacttctacggcttccgc
gggctgtccttcttccctttctcttttgaagtgcgattctcggatgttcgcatctacaag
atcggggcgccgtccatcccggactcttgcctgccactgggaatgtctcaggacgacacg
cagctgaaactggtgccggtgactccagggagagacctgacgtatcacgtgctgagtgtg
agcagcgtcgacgacggagacgaagacgccaggaagagcatcgtggagagccccgtctgc
ggattcattgtggtcacaaacgttgacactcaggcacaggtgatgaaagtgctgtcacct
gcacccagaccactgcccagacacacgctgctcatcatggacatccgctttatggacatg
aaatga
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integrated database retrieval system
