Poecilia latipinna (sailfin molly): 106935437
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Entry
106935437 CDS
T08005
Name
(RefSeq) embryonic polyadenylate-binding protein B-like isoform X1
KO
K13126
polyadenylate-binding protein
Organism
plai
Poecilia latipinna (sailfin molly)
Pathway
plai03015
mRNA surveillance pathway
plai03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
plai00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
106935437
09123 Folding, sorting and degradation
03018 RNA degradation
106935437
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plai03019
]
106935437
03041 Spliceosome [BR:
plai03041
]
106935437
Messenger RNA biogenesis [BR:
plai03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
106935437
mRNA cycle factors
Stress granule specific factors
106935437
Spliceosome [BR:
plai03041
]
Complex C
Other components
Complex C specific factors
106935437
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_5
RRM_10
RRM_3
RBD_RDR6
YflT
Motif
Other DBs
NCBI-GeneID:
106935437
NCBI-ProteinID:
XP_014871382
Ensembl:
ENSPLAG00000017490
LinkDB
All DBs
Position
Unknown
AA seq
655 aa
AA seq
DB search
MNGSGPAYPLASLYVGDLHPDVTEAMLYQKFSPAGPIMSIRVCRDIITRRSLGYAYINFQ
QPADAECALDTMNYDVIKGRPIRIMWSQRDPGLRKSGVGNIFIKNMDESIDNKALYDTFS
AFGNILSCKVVCDEKGSKGYGFVHFETQEAANRAIETMNGMLLNDRKVQKMGKKESGIVN
PKDRFLWEKCQFSQLRSANRFVGHFKSRKEREVEFGSKAMKFTNVYIKNFGEDFTDEKLK
EVFSAFGRTLSVRVMKDEKGQSRGFGFVNYAHHEDAQKAVDEMNGKELNGKTIYVGRAQK
RLERQGELKRKFDQIKQDRIQRYQGVNLYVKNLDDGINDERLRKEFSPYGTITSAKVMTE
GGQSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRREERKAILTNKYMQRLAT
LRTMSNPVIDSYPQSGYYMTVPQPPTRSFYNHSAVSNLRPVPRWMGQPPRAQGSYSAQYI
GSPLPRRGSPTITTVRQASTQAPRIITSSQKTTLPSDNIGTQTGGVPRGNQYKYSSGVRN
PLHVVTVPAPMTRPQVAPVAVAEPAVHIPGPEPLTASMLAAAPLMDQKQLLGERLYPLIH
ALHPNLAGKITGMLLEIDNSELLHMLESPESLNSKVEEAIAVLQAHKAKECSPKK
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atgaatggcagtggtccagcgtatcctctggcctctttgtatgtcggggacctgcaccct
gatgttacagaagccatgctgtatcagaagttttctcctgctggacccatcatgtcgatc
cgcgtgtgccgggacatcatcacccgcagatccctaggatacgcctatataaacttccag
cagccagctgacgcggagtgtgccttagatacgatgaactatgacgtcattaagggtcga
cccattcggataatgtggtctcagcgtgacccaggtctcaggaagtccggtgtgggaaac
atctttatcaagaacatggatgagtccattgacaacaaggcgctgtatgataccttctct
gcctttggcaatattttatcctgcaaggttgtctgtgatgagaagggatcaaaaggctat
ggctttgttcactttgagactcaggaggctgcaaatcgggccattgaaacaatgaatggg
atgcttctgaatgacaggaaagttcaaaagatgggtaaaaaggaatctggtattgtcaac
ccaaaggaccgtttcctgtgggaaaaatgtcagttctcccagcttaggtcagcaaatagg
tttgttggccacttcaagtctcgcaaggaaagggaagttgagtttggctccaaagctatg
aagtttaccaatgtctacatcaagaactttggagaggacttcactgatgagaaactgaag
gaggttttttctgcttttgggaggaccctcagtgtgcgagtgatgaaggacgagaagggc
caatcaagagggtttgggtttgtcaactatgctcaccatgaggatgctcagaaggctgtg
gatgaaatgaatggaaaggagcttaatgggaagaccatctacgtaggtcgcgctcagaag
cgcttggagcgccagggggagctgaagcgcaagtttgaccagatcaaacaggatcgcatc
caacgctatcagggggtgaatctgtatgtgaagaacttggatgatggcataaatgatgaa
agactccggaaggaattttctccttatggtacaatcacaagtgctaaggtgatgactgaa
ggtggccaaagcaagggctttggcttcgtctgcttctcgtctccagaggaagcaaccaaa
gcagtgactgaaatgaacgggagaattgttgcgaccaagccgctgtatgttgcgctggca
cagaggagggaggagcgtaaagctattctaactaacaagtacatgcagagactggctacc
ctgaggaccatgagcaaccccgtcatcgactcgtacccccagtcgggatactacatgacc
gtaccacagcctcccactcgctctttctacaaccacagtgctgtcagcaacctgagacca
gtccctcgttggatggggcagccgcccagagcccagggatcttactcagcccagtatata
gggagtcctcttcctcggcgtggttcaccaaccatcactacagttcgacaagcttccact
caggctccacgcatcataacctcctcacaaaagacgactcttccttcagataacataggg
acgcagactggaggagtgcccagaggaaatcagtacaagtattcgtctggagtgaggaac
cctttgcatgttgttacggttcctgcgcccatgacgagaccacaggttgctcctgtggct
gtggctgaaccagcagttcacattccaggcccggagcccctcaccgcttcaatgctggct
gcagctccactcatggatcagaaacaactccttggggagcgactgtatccactgattcac
gcccttcacccaaacctggcaggaaaaatcacagggatgctgctagagatcgacaattcc
gagctgctgcacatgctggagtcaccggagtccctgaactctaaggtggaagaggcaatc
gctgtcttgcaggctcacaaggcaaaagagtgttctccaaaaaagtga
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