Poecilia latipinna (sailfin molly): 106935468
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Entry
106935468 CDS
T08005
Name
(RefSeq) collagen alpha-1(XVII) chain-like
KO
K07603
collagen type XVII alpha
Organism
plai
Poecilia latipinna (sailfin molly)
Pathway
plai04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
plai00001
]
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
106935468
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
106935468
NCBI-ProteinID:
XP_014871433
LinkDB
All DBs
Position
Unknown
AA seq
1522 aa
AA seq
DB search
MDKVTAEKVVSSGGGAAASSSSGVVKKSVTACGVTSQSDFSFSSGGSGGKAAAGGSEGTS
SSVLIKSSSSGAGNVRVTTVGTSSAQSSGQRSGTSGTSGATVASGRGERSKEAGGAGGAG
GAGGGSSSMSYSFGSGSRETKKEGGLGAVTVSTVTKSSYTSGGSREGKKGSSSSGITYSL
PPKERKSVTTMAAALSDVFDESSDSSLEYSRKEYGSSTATSTSATRGRTQSRESEIRARL
QSASPPARWTELDDVKRLLRGNRSTSTSPTQSPNNTLPIPKKASMEAKATSEGSSGPIDQ
YGSVWSGDVSSGYYSTNPNNYTATSHLYPSGAGVQNNLTLGSPSVNAGQAVSGSVPAYGV
QNNLTSPTVLSPAGAGSQIVYGVQKNVSGLTAPTVRPSSPTSYEASGKDFNFVLIEKENA
PIKKETERLVMAKDTGKQFVSTAPATYSGTYSEDSLKREKQKLLSSAVDEGTDAKSSTLK
STTKDKATYAEIRKDELGFGFCSCCSWWKWLLALVCTLLLLLGLLFGLITLGEEVRRLKN
RVDALEAAPGSASTSRLWSSSGINIIDPPDSAYIERTSSGSTLTRSDNSINLGPGGGTGT
GPGQDNTALQRTVQQLLRTELQSNAMRETLAYSLKGEKGDPGPKGDPGALGQKGDSGFPG
LPGPPGQIGHSGLDGPRGPKGNPGEPGPEGQPGQRGREGPMGPRGESGPPGVGEKGDKGS
QGEPGHPGPAGGPGPMGPKGAAGEQGVSGVPGVPGPKGFQGEAGPSGAKGDRGAPGVPGI
KGDNGERGPRGPVGEPGTPGPQGPSGPKGSKGSGGESGSIGLPGARGLPGLPGDVGPQGP
PGIQGPPGVAGIPGQPGGKGEPGSPGKVISPVNSDTVAIPGPPGPAGPPGSAGSPGLSGP
IGPAGVPGQPGTKGERGDKGDKGDQGQRGEPGTGLPGPPGLPGSRGEPGPQGPPGEGKQG
PPGRRGPPGDPGVGNPGPRGEKGEPGSFLPTSETFFAGPPGPPGPPGKEGAQGFQGEPGQ
PGLPGSPGEPGFPGPPGPPGGPVRAGGEPGSSFIPGPPGPPGPPGPPGSESPAVGQYIAD
YLQSDSIRQYLAGPPGPPGPPGEPGSPGVSEDALVDNVASRVISYIQSSGPGAPGPPGPP
GSVSVNDIISLLQRDEVRIYLMGPPGPPGPPGGPGIGGFSINPQEVAERVYGLLNQRGAL
GAPGAPGPPGPPGPPGNLLATGFQSLIGPPGPPGAQGVPGPQGPPGPPGPPGFGSYVNSD
IRDYLQSVSLRGPPGPPGPPGPEGPPGPIGRMVSFTDHHNRDMLKPERQDYVRPEFDGGD
GLSRPMFGPPGLPGPPGPPGHKGEPGLGSSTEWGPNSINLSIMAERLTDYIKAHGVLDSI
VENYNSRIFQGPPGPPGPPGPAWFGSHGNATNIMEIIEAVRQQSHHGPAVHGPRGPPGPP
GPPGESRLFGSHTNVVDIMDYIKAHGMIVGPQGRPGPKGDQGLPGLTGAKGERGYPGPQG
YKGPKGDRGDLLLTRRRRSSGV
NT seq
4569 nt
NT seq
+upstream
nt +downstream
nt
atggacaaggtgaccgcagagaaagtggtgagctcaggtggaggagctgcagccagcagc
agctcaggtgtggtcaaaaaatcagtgacagcctgtggagttacatcacagagtgatttt
tctttcagctccggtggctcaggtggaaaagctgcagcaggaggatcggagggtacgagc
agctcagttctgatcaaatctagcagttctggagccggaaacgtacgcgtcaccaccgta
ggaacttcctctgcccagtcctcaggtcagaggtcagggacctcagggacctcaggggcc
actgtggcctcagggagaggagagcggtctaaagaggccggaggagcaggaggagcagga
ggagcaggaggagggtcctctagcatgtcctacagttttggaagtggaagcagagaaact
aaaaaagaagggggtcttggtgctgtgaccgtttccacggtgaccaaaagcagctacaca
tcaggagggtccagagaagggaagaagggctcgtcatcctctggcattacgtactcactt
cctccaaaggagaggaagagtgtgaccaccatggcagctgctctgtcagacgtctttgac
gaaagctccgattcttccctggagtacagcaggaaggagtatgggagttcaactgcaact
tcaacttcagccactagggggagaactcaaagcagagagagtgagatcagagccaggctt
caaagtgcttcacctccagccagatggacggagctggatgatgtgaagcgcctgctgagg
ggaaaccgctccaccagcaccagccccacccagtcccccaacaacacactgcccatcccc
aagaaggccagcatggaagccaaggccacatctgagggctcctcaggtcccatcgatcag
tacggcagcgtttggtcaggagacgtgagcagtggatattacagcaccaaccccaacaac
tacaccgctacctcccacctttacccatcaggtgccggagtccagaacaacctgactctc
ggctctccctctgtgaacgctggacaagctgtcagcggctccgtgccagcatacggtgtg
cagaataacctgaccagtccaacggtcctctcacccgctggtgccggctcacagatagtt
tatggcgtccagaaaaatgtgtctggactaactgcacccacagtgagacccagcagtccc
accagttatgaggcctcagggaaagacttcaactttgtgctgatagagaaggagaacgct
cccatcaagaaggagacggagcggctggtcatggccaaagacaccgggaagcagtttgtg
tccactgcgcctgccacttactcaggcacttactctgaggactcgctgaagagggagaaa
cagaaacttttgtccagcgcagtggatgaaggaactgatgccaaatcttcaaccttgaaa
tctaccacaaaagacaaagcaacctatgcagagatccgtaaagacgagttgggttttggg
ttctgctcctgctgcagctggtggaagtggctgctggccctcgtctgcaccctgctgctc
ctcctggggctcctcttcggactcatcactttgggcgaggaggtgagacgcctgaagaac
cgtgttgatgctctggaagccgcccctggcagtgcatcaaccagccgcctgtggtcttcc
tccggcatcaatatcatcgacccgcctgactcagcatacattgaaagaacctcttctggt
tccaccctcacccgctccgataattcaatcaacctcgggcctggaggaggcacaggaacc
ggaccaggacaggacaacaccgccctgcagaggaccgttcagcagctgctcaggaccgaa
ctacaatcaaatgctatgagagaaactcttgcttattctctaaaaggagagaagggagat
ccaggacctaaaggtgatccaggggcacttggacaaaaaggtgatagtggttttcctgga
ctgccaggtcctcctggacagattggacactcaggactggatggaccaaggggaccaaag
ggaaatccaggtgaaccaggtccagaaggacaaccaggccagaggggacgggagggacca
atgggcccccggggggagtctggaccgcctggtgttggagagaaaggagataaaggttct
cagggtgaaccaggacatcctggtcctgctggaggtcctggacccatgggtccaaaaggt
gctgctggagagcagggtgtctctggagtcccaggtgtacctggtccaaagggattccaa
ggcgaagctggaccgtctggagccaaaggtgaccgtggagcaccaggtgttccgggaatt
aaaggggacaatggagaaagaggacctcgtggaccagtgggtgaaccaggaactcctgga
cctcaaggcccatcgggaccaaagggatctaaaggaagtggcggtgaatcgggttcaata
ggacttcctggtgctagaggtttaccgggtctccctggtgacgttggtccccaaggtcct
cctggaatccaaggacccccaggcgttgcaggaattccaggccagcccggtggtaaaggt
gaaccaggatctcctggtaaagtcatcagcccggtaaactctgacactgtggccattcct
ggacctccaggaccagctggacctccaggttctgctgggtccccaggtttgtctggtccc
attggtcctgctggagtcccaggccaaccaggtacaaagggagaacgaggggataaggga
gacaagggggaccaaggtcaacgtggagagccaggcaccggccttcctggacccccaggg
ctcccagggtcccgaggtgaacctggacctcaggggcctcctggtgagggtaagcagggg
cccccaggccgcagaggccctcctggagatccaggtgttggaaatcctggacctcgggga
gagaaaggagagcctggcagcttcttgccaacatctgaaaccttctttgcgggaccacca
ggacctccaggtccacctggtaaagaaggagcacaaggattccaaggtgaaccaggtcag
ccggggcttccagggagtccaggggagccagggttcccaggacctccaggacctccaggt
ggcccagtaagggcaggaggggaacctggaagctcattcattcctggaccacctggacca
ccgggaccaccaggaccacctgggagtgaatcacctgctgttggccagtacattgctgac
tacctccagagtgacagcatcagacagtacttggctggacctcctggacctcccggacct
cctggagaaccaggttctcctggtgtttcagaagacgccctggtggataacgtagccagt
cgagtaatctcctacatccagagttctggcccgggggcgcctggtcctcctggcccacct
ggatccgtctctgtcaatgacatcatcagtctactgcagcgagacgaagtgaggatatac
cttatgggtccacctggcccaccaggacctcctggaggtccaggtatcggcggcttctcg
attaacccccaggaggtggctgaacgtgtctacggcctcttgaatcagagaggggcgctg
ggtgcacctggagctccaggacctcctgggcctccagggcctcctggaaacctgctggca
actgggtttcagtctctcatcggccctccaggaccccctggtgcacagggtgttcctgga
ccacagggtccccctggcccccctggaccaccaggatttgggagctacgtcaactcggac
atccgtgactacctgcagagcgtttccctcagaggccctccaggccctccggggccccct
ggaccagagggccctcctggtccaatcggacgaatggtttcctttacagaccatcacaac
agagacatgctgaagcctgaaagacaagattatgtccggcctgagtttgatggtggtgat
ggtttgagtcgacccatgtttggaccccctggtctaccggggccccctggacctccagga
cacaagggagagccaggtttgggcagtagcaccgagtggggcccaaactctattaactta
tccatcatggctgaaagattgactgattacatcaaagctcatggcgttctggacagcatc
gttgagaactacaacagcaggatcttccaaggtcctccagggccaccggggcctccaggc
cccgcctggtttggttcccatggaaacgccacaaatattatggaaattattgaagccgtt
aggcagcagagccaccatggacctgccgtccacgggccccggggtccacccggcccccca
ggtccaccaggagagagccgactgtttggttctcacaccaacgttgttgacataatggac
tacatcaaagcacatggaatgattgtgggaccacaagggagaccgggaccgaaaggggac
caaggacttccaggactaacgggagcaaaaggtgaacgaggttatcctgggcctcaggga
tacaaaggaccaaagggtgacagaggagatttattgctgacaagaagaaggagaagctct
ggtgtttga
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integrated database retrieval system
