Poecilia latipinna (sailfin molly): 106935717
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Entry
106935717 CDS
T08005
Name
(RefSeq) collagen alpha-1(I) chain-like
KO
K06237
collagen type IV alpha
Organism
plai
Poecilia latipinna (sailfin molly)
Pathway
plai04382
Cornified envelope formation
plai04510
Focal adhesion
plai04512
ECM-receptor interaction
plai04518
Integrin signaling
plai04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
plai00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
106935717
04518 Integrin signaling
106935717
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
106935717
09142 Cell motility
04820 Cytoskeleton in muscle cells
106935717
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
106935717
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
plai04147
]
106935717
00536 Glycosaminoglycan binding proteins [BR:
plai00536
]
106935717
Exosome [BR:
plai04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
106935717
Glycosaminoglycan binding proteins [BR:
plai00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
106935717
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
106935717
NCBI-ProteinID:
XP_014871824
LinkDB
All DBs
Position
Unknown
AA seq
1673 aa
AA seq
DB search
MAFKVTFMMFFTSWWFIFLVIHVQLLKAGKIEGPCQGRDCSQCVCHPAKGARGPPGKPGR
QGIQGPMGQRGRIGPQGEKGTVGAAGSHGLQGPKGDRGLTGVPGFTAHEGFPGHPGAGGE
PGLPGLDGCNGTRGHPGPDGLPGLDGLHGPPGPKGAKGSKGTPNYTGALPGPPGDKGRDG
DHGQTGSPGNIGPKGLRGLHGLRGPQGVEGPKGVKGSPGDPGKSPRGEIGEQGPPGLPGP
PGPEEQKGYPSEQFFQKGEKGNKGQHGPCGLKGRRGVGGDIYSPSQTGPKGEQGILGFPG
DRGSPGQSGGVGLTGQEGVPGDKGLPGLIGRKGEKGWPGDPGPPGFPQFHNGSTVRGPKG
DRGYPGAPGFPGETGYMGVPGPPGPPGLPEAHGRPGQPGDPGEKGQKGEPGTYDPNEILF
IRGPKGVKGHQGERGPDGCPGPQGCGNYYCEPGSLGEPGEDGPRGFSGNKGLKGVKGCPG
ECKCVHALRAVGPPGPPGYPGSPGFPGAPGPQGEPGLRGNDGPRGPDGAPGFIGLKGRKG
EKGDTYVRGTKGAKGDKGEPGYAGPPGGTGESGKDGFPGPVGEPGPPSPGYMGRPGPKGY
PGRPGPKGFPGPRGPPGPGFPGLKGEPGLQGNQGLPGLPGIPGRPGPPGETEPCCHEGQI
GPPGPKGEPGLPGVQGQPGRDGYPGTPGQQGPKGIKGDDGETLIGPPGSIGANGDPGDPG
PAGISLDGPEGLPGLPGPHGRKGDPGHILSAWPGLVGPPGPRGAVGSYGIPGIPGYPGSP
GLQGPPGPQGRKGDPGDSGDLGDTGVPGPPCTVCELVGPPGPPGPSGRRGEQGVPGLPGQ
KGVKGDVGAPGRGQKGLKGNPGIPGAPGPAGSAGVVGPQGDPGIHGFPGQKGEKGLPGKP
GSRSMPGNPGPPGQPGEKGERGFPGRYGTTGDPGFPGNKGSPGPTGLPGLCSLVNLTKGP
SGFSGRRGPPGQTGFAGYKGSTGTPGDLGPDGWPGSQGLKGFAGIPGREGLSGLRGLHGI
KGFPGPRGYSGNTGDQGDPGPPGQIGIPGLPGFPGAKGNKGQSYGRPGPQGLKGLPGEIG
PSPHRGSPGHPGDPGPRGRQGQPGHPGVTGETGRQGGPGSPGSRGLPGRPGIRGPPGDEG
VVGPPAPPGQCGNPGPPGTPGLDGLNGLRGPKGMKGADDQGTSGPRGQKGIPGAKGARGI
SGPAGATIPGVKGQTGAPGNTGFPGIPGTPGSSGKTCQNPLHGPQGDRGYEGLPGPSGPP
GPPGPPGGSISYKGDLGPDGHRGPPGLRGNKGVPGPPGPRGQSGSPGPKGEKGPDGPRGP
LGSRGQQGISGPQGCKGEIGPIGDPGVKGQPGDLITVDLRVPPPGAPGPKGVSGSEGSQG
YVGRPGPFGRTGQKGPKGFVGFPGTPGPPGLDGYSGDPGDVGERGYTGPQGAPGPPGDPG
EPGHRRRLRSGFLLVIHSQSVLVPQCPAGSNQLWVGYSLVYLEGQEKAHTQDLGQPGSCL
PVFSTMPFSYCDKDACYYSSRNDKSYWLSTTAPIPMMPLFGQEISLHISRCVVCETFSPA
MPFHSQDQAIPPCPDGWKSLWTGYSFLLHTGAGDEGGGQSLASSGSCLRDFRTHPFIECQ
GAQGSCHYFSNLYSFWLTTVRDREDFVPVKPGTIKAADQQRHKASRCNLCLRD
NT seq
5022 nt
NT seq
+upstream
nt +downstream
nt
atggcgttcaaagtaactttcatgatgttttttacctcctggtggttcattttcctggtc
atccatgtgcagctgctgaaagcaggtaaaattgaaggcccgtgtcaaggcagagactgc
tctcagtgtgtgtgtcatcctgctaaaggtgcaaggggacctccagggaaaccagggagg
caaggtattcaaggtccaatgggacaacgaggacgaattgggcctcaaggggagaaggga
acagtgggcgcagcaggatcacatggcctacaggggccaaaaggagaccgtggtttgact
ggtgttcctggtttcacggctcatgaaggatttccaggccaccctggagcagggggtgag
cctggtttaccaggactggatggctgtaatggaacaagaggtcatccaggaccggatggt
ctgcctggactggatggcctccatgggccacctggaccaaagggtgctaagggaagcaaa
ggaacacctaattacactggtgctcttccaggtcctcctggtgataaaggtagagacgga
gatcatggtcaaacaggaagcccagggaacattgggcctaagggtctccgtggccttcac
ggacttcgtgggcctcagggtgtagagggtcctaaaggtgtgaaaggatcacctggtgac
cctggaaaatcgcctagaggtgaaattggtgaacaaggcccacctggactacctggccca
cctggaccagaagaacagaaaggatatccttcagaacaatttttccaaaagggtgagaag
gggaataaaggtcagcacggaccatgtggactaaaggggcgtcgaggtgttggaggagat
atctacagccctagtcaaacaggacctaaaggagagcagggaatcctgggatttccaggg
gataggggtagtcctggacaatctggtggagtcggattaactggacaagagggtgtccct
ggagacaaaggacttccagggctcattggcagaaaaggagaaaagggttggccaggggat
ccaggtccccctggtttcccacaatttcataatggaagtactgtgagaggtcctaaagga
gaccgtgggtatccaggtgcacctgggttccccggagagactgggtatatgggtgtacca
ggccctccaggcccaccagggttaccagaggcacatggccgacctggtcaaccaggtgac
cctggtgaaaagggtcagaagggagaaccagggacatacgatccaaatgaaatacttttc
attcggggaccaaagggagtaaaagggcatcaaggagaaagaggccccgatggatgccct
ggtccacaaggatgtggaaattattactgcgagcctggttctctaggggaacctggtgag
gatggacccagaggattttctggaaacaaaggcctaaaaggagtaaaaggttgtccaggg
gaatgtaagtgtgtgcatgctctgagggctgttgggccacctggtccacctggttatcca
ggatctccaggatttccaggagctccgggacctcagggggagcctggactgaggggaaat
gatggcccaagaggaccagatggcgcacctggtttcataggtctaaaaggaagaaagggt
gagaaaggtgacacgtatgtgaggggtactaaaggtgcaaaaggggacaaaggagaacca
ggatacgctggtcctccaggaggaacaggtgagtctggaaaagatggcttccctggtccg
gtgggagaacctggtccaccaagtcctggctatatgggacgtcctggacccaaaggttat
ccgggccgtccagggcccaaaggattccctggcccccgtggtcccccaggtcctggattt
cctggtctaaagggagaacctggacttcaaggaaatcagggacttccagggcttcctgga
atcccaggacgaccaggtccaccaggtgaaacagaaccatgctgtcatgaaggccaaatt
ggaccaccagggcctaagggtgagccagggttaccaggtgttcaaggtcaacctggaaga
gatggatatccaggaactccaggacaacaaggacctaaaggtataaagggagatgatgga
gaaactctgatcggaccaccaggatctattggtgcaaatggagatccaggtgaccctggt
cccgctggcattagcctggatggccctgaaggtctccctgggttaccaggaccgcatggc
agaaaaggagacccaggacacatcctttcagcttggccaggtctagttggtcctcctgga
ccacgaggagctgtggggtcatacggaattcctggaatccctggatatccaggatcacca
ggattacaaggcccaccaggaccccaaggtcgcaagggagatcctggggacagtggagac
cttggagatactggtgtcccaggtccaccgtgtactgtttgtgaactggtaggtccccct
ggacctccaggaccttcagggcgccgtggtgaacaaggagtgccaggcctccctggtcag
aaaggtgtgaagggagatgttggtgcacctggtcgaggacagaagggtttaaaaggtaat
cctggtattcctggggctcctggcccagctggatcagcaggggttgttggtcctcaagga
gaccctggtattcatggcttcccaggacagaaaggtgagaagggcttgcctgggaagcct
gggtctagaagtatgcctggcaatcctgggcctccagggcaaccaggtgaaaagggagaa
agaggttttcctggacgttatggaactacaggtgatccaggatttcctggtaacaaaggc
tcacctggacccactggactcccaggattatgttcgcttgtcaacttgacaaaaggtcct
tctggattttccggaagaagggggcctcctggtcagacagggtttgcaggatacaaaggc
agcactggcacgcctggtgatttgggtcctgatggatggccaggatcacaaggattaaaa
ggatttgctggtattccaggtagagaaggattatcaggactccgtggacttcatgggatt
aaagggttcccaggtccaaggggttattctgggaatactggagatcagggagatccaggg
cctccaggacaaattggtatccctggcctcccgggatttcctggtgcaaaaggtaataaa
gggcaatcctatgggagacctggcccacaaggactcaaaggattacctggggagattggg
cccagtccacatagaggaagtccagggcatccaggtgacccaggacccaggggaaggcaa
gggcaacctggacatccaggggtgactggggaaactggaagacaaggagggccaggctct
cctgggtcccgaggtctaccagggcgtccaggcattagaggtcctccaggtgacgaagga
gttgtgggaccaccagccccccccggccaatgtggcaatccaggtccccctggaactcca
ggtctggatggattgaatgggctaagaggtccgaaagggatgaagggagcagacgaccaa
ggcacttcaggacctcgtggacaaaagggtatacctggagccaaaggcgcccggggcatc
tcggggccagcgggggcaactattccaggggttaaaggccaaactggggcacctgggaac
acaggttttccaggaataccaggaacacctggtagctctggcaaaacctgccaaaacccc
cttcatggacctcagggtgatagaggctatgaagggctcccaggaccctcaggtcctcct
ggtccacctggtccacctggtggcagcatttcatacaaaggagaccttggaccagatggc
catcgtggaccaccaggtcttaggggaaataaaggcgttccaggacctccagggcctcgt
ggccaaagtggctctccaggaccaaagggtgagaaaggtcctgatgggccaaggggccct
ctgggatccagaggtcaacagggcatctctggacctcaaggttgcaagggagaaattggc
ccaattggagatccaggtgtcaaaggtcaacctggtgatttaatcactgtagatttaagg
gttcctccccctggagccccaggaccaaaaggcgtttcaggaagtgaaggaagtcaaggg
tatgtgggtcgtcctggtccttttggtcgaacaggacaaaagggtcctaaagggtttgtg
ggctttcccggtacaccagggccacctgggttagatggatacagtggagacccaggtgat
gttggtgagcgaggatacactgggcctcaaggtgcccctggtcctcctggtgatccaggc
gagcctggccatagaaggcgacttagatcaggctttcttttggttatccacagccagtca
gttttggtaccacagtgtcctgcaggtagcaaccagctgtgggtgggatacagtctcgtc
tacctggaaggacaagagaaggctcacacacaggatctgggtcagcctggctcttgtctc
cccgttttctccaccatgcctttctcctactgcgacaaagacgcatgctactactccagt
cgcaatgacaaatcctactggctttccactactgctcctataccaatgatgccactcttt
ggccaggagataagcctccacatcagccgctgtgttgtgtgtgagaccttttcaccagca
atgccatttcacagtcaagatcaagcaattcctccctgcccagatggctggaagagttta
tggacaggatactccttccttctgcacacgggagcaggtgatgagggtggtggacaatcg
ttggcttcttctggtagctgcctcagggattttcgaactcatcccttcattgagtgtcaa
ggtgcgcagggttcctgtcactacttttccaatctttacagtttttggctaactactgta
agagatagagaggatttcgtccctgtaaagcctggtaccatcaaagcagctgatcagcag
cggcacaaggccagtcggtgtaatctttgccttcgggattaa
DBGET
integrated database retrieval system
