Poecilia latipinna (sailfin molly): 106935718
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Entry
106935718 CDS
T08005
Name
(RefSeq) collagen alpha-5(IV) chain-like
KO
K06237
collagen type IV alpha
Organism
plai
Poecilia latipinna (sailfin molly)
Pathway
plai04382
Cornified envelope formation
plai04510
Focal adhesion
plai04512
ECM-receptor interaction
plai04518
Integrin signaling
plai04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
plai00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
106935718
04518 Integrin signaling
106935718
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
106935718
09142 Cell motility
04820 Cytoskeleton in muscle cells
106935718
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
106935718
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
plai04147
]
106935718
00536 Glycosaminoglycan binding proteins [BR:
plai00536
]
106935718
Exosome [BR:
plai04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
106935718
Glycosaminoglycan binding proteins [BR:
plai00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
106935718
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
106935718
NCBI-ProteinID:
XP_014871825
LinkDB
All DBs
Position
Unknown
AA seq
1654 aa
AA seq
DB search
MRPQAIIVFLTFFVMISTFTEGKSCVCNGKSRCHCKGVKGNRGEKGFPGDPGLPGSEGHP
GSLGQPGPTGPKGNTGSDGPMGSKGDPGPDGKEGFAGSHGLPGVPGLQGPLGPPGYPGCN
GTDGDPGLPGVEGDPGIDGNPGPPGQPGPKGDSQTTADSVPGPQGPQGKDGRPGSPGLPG
EIGLRGDIGVRGPPGSPGNTGAPGTKGQEGAPGTRGPKGFQGPPGPPGPPGRTKDFFTGT
LSITDLKGDRGDAGDKGCKGEPGDPGSLYHTKGQKGDRGNPGPEGKPGKDGEPGNPGFRG
RPGRRGEPGHPGPLGGMGEKGNRGPSGPPGDILLLEPLKGHIGDPGPPGLPGFPGIRGVL
GFPGPPGTPGYALGIYVPGERGFAGPKGHNGDPGEPGGFYTGPPGLDGDPGDPGPRGNQG
KPGRFVNGTDCVIKGLPGIKGVKGLPGPTGNNGYIGETGERGEICYECQTSGLSGPAGLR
GPPGLPGTNQGRGEKGDPGFPGPSGLPGPPGSVGLPGFPGQPGQKGEPSGNVSPGLKGEK
GEPGLPGGPGPNGSPGSPGLPGSKGTPGPPGELCERLGVEGDPGFPGPPGPQGKEGPIGY
PGPAGYGPPGLPGTKGHTGVPGLPGEPGIPGQKGESGHFHTQGPPGPQGFQGPPGFEGSP
GVQGLPGVPGNPGKAGQKGERGDLLLSGKPGPPGQKGDKGLPGLPGAPGWGSPGQFGPPG
PPGAPGEKGDSGHGHPGRPGPPGPPGENGAPGPAGDPGIPGLPGNPGIIGKPGPPGEKGR
KGSLGPPGLPGTKDLCIGLPGPIGRPGPDGHTGDTGANGSPGEKGNAGLPGFGSPGLQGG
PGTSGLSVPGPHGPPGQKGSRGRDGWPGQRGQIGDPGPDGISGRGPDGKPGNTGQPGPRG
DPGPDGARGRQGPQGMVGDPGVRGPPGLPCPTRFYNGPPGNPGEPGNPGLLGLTGDPGRP
GPKGQRGRAGPPGDLGQRGPPGEPGVDGQAGSEVRRGPDGAPGDSGHKGHPGLKGVKGDP
GIPGRPGPDGVPGPTGSKGAAGEPSYVYGPPGPPGQKGEPGSSSDVMLRGQKGEPGIAGQ
VGAPGSPGAKGNTGPDGKNGSPGFPGLIGSDGPPGIKGHMGPIGLPGVPGPPGHTGQRGI
KGSQGLDGIPGPPGQKGDTVIIGGAQGRPGDPGPPGPPGDIGPPGLLGRGSPGPEGDRGT
PGLPGLHGESGLPGREGTCIPGPKGDRGFPGNPGNQGYPGPPGPQGLRVSGSKGDRGEPG
FPGSPGFGGPPGNPGPQGPYGPPGVNGFPGLRGDPGPSGRHGPLGDRGDPGYSPGPCGPR
GHKGFPGHPGRKGEPAYVDRIHEPGPPGLPGPKGNPGLPGAIGPPGSQGPPGPPGVRGPH
GVSSPGPPGFTGHTGDKGKAGLPGQVGGPGIPGRKGLRGLPGRAATHYTDGFLIARHSQS
IKVPDCPNGTSLIYSGYSLLFVNGNERAHGQDLGTIGSCLPHFSTMPFLFCDTESTCRYA
SRNDYSYWLSTDKLMPANMVAVTADKVAPYISRCSVCETASKIIAFHSQNTLIPECPRGW
ETLWTGYSFIMQTGAGAEGSSQPLMSPGSCMENFRRVPFIECHGRGTCNYYPDSYSYWLA
SLDRNNMFSKPVPQTVKGFSLQRVISRCRVCRKS
NT seq
4965 nt
NT seq
+upstream
nt +downstream
nt
atgagaccacaagcgatcatagttttcctgactttctttgtaatgatctcgacattcact
gaaggaaaaagttgtgtatgcaatggaaagtcaagatgccactgtaaaggagtaaaaggc
aacaggggagagaaaggttttccaggagatccgggtcttccaggatcagaggggcaccca
ggatccttgggtcaacctgggccaacaggaccaaagggcaatactgggtctgatggaccg
atgggatcaaaaggcgatccgggaccagacggcaaggagggatttgctggatctcatggc
ttgccaggtgttccaggtttacaggggcctctagggcccccgggttatccaggctgcaat
ggaacagatggagaccctggacttccaggtgttgaaggagatcctggtattgatggaaat
ccaggacctccaggtcagcctggtcctaagggtgactcacagacaacagctgactcagtg
ccagggccacaaggaccacagggaaaagatggaagaccgggttctccggggttaccaggt
gagataggactacgtggggacattggagtaaggggccctcctgggtctcctggtaatact
ggagctcctggtaccaagggccaggaaggagctccaggaactcgaggaccaaagggtttc
caaggcccccctggcccgcctgggcctccaggcaggactaaggacttttttaccggcacc
ctgtcaataacggatttaaaaggagatagaggcgatgcaggagacaaaggatgcaaaggc
gaacctggagatcctgggagcctctaccacacaaaagggcaaaagggagacagaggaaac
ccaggcccagaaggaaagccaggaaaggatggtgaacctggaaatcctgggtttagggga
agaccaggacgcagaggagagccaggacatccaggcccactaggaggaatgggtgaaaaa
ggaaacaggggtccatctggtccacctggagatatacttttgctcgaaccactcaaggga
cacattggagatcctggccctccaggtctccctgggttccctgggatccgaggtgtttta
gggtttccggggccccctggaactccaggttatgcacttgggatttatgtaccaggtgaa
cgtgggttcgcaggcccaaaagggcacaatggagaccctggggagcctggggggttttac
acagggcctccagggctagatggtgatcctggtgatccagggcctcggggaaaccaaggc
aaacctggacgctttgtaaatggaactgactgtgtcattaagggtctccctgggatcaag
ggagttaaaggtttaccaggacctacggggaataatgggtatattggagaaacaggagag
agaggggagatctgttatgagtgtcaaacatcgggactttcaggaccagcaggtctccga
ggtccacctggccttcctggcactaatcaaggacggggtgaaaagggggatcccggcttt
ccaggtccttcaggtttaccaggacctccagggtctgttggtctaccaggattcccaggc
cagccggggcaaaagggagagccatccggtaatgtctctccagggctgaagggggaaaaa
ggagaaccaggactccctggaggacccggtccaaatggttctcctggatctccgggttta
ccaggaagtaaaggcactccagggcctcctggagaattgtgcgaacgccttggagtagaa
ggagatcctgggtttcctggtccaccaggacctcaagggaaagaaggacccattggctac
cctggaccagcgggttatggacctcctggtctaccagggaccaaaggacacactggtgta
cctggtctgccaggagaacctggaattccaggccaaaaaggcgaatctggtcattttcat
acccaaggcccaccaggaccacaaggatttcaaggaccgcctggctttgaaggaagtcca
ggtgttcaaggactaccgggtgtccctggaaatccaggcaaagcaggacaaaaaggagaa
agaggggacttgttacttagtggaaagccaggacccccagggcagaaaggtgataagggg
ctgcctggccttccaggtgctccaggttggggttcacctgggcagtttggtcctccaggc
cctcctggtgcccccggagaaaagggtgacagtggccacggacaccctggtcgtccgggt
cctccgggaccacctggtgaaaatggagctccagggcctgccggcgatcctggaatccct
ggtcttccaggaaatcctggaataattggcaaacccgggcctccaggagaaaaaggaaga
aaaggttctcttggccctccagggcttcctggtaccaaagatttatgtatcggtttgcct
ggaccaataggacgtccaggaccggatggacatacaggagatacaggagctaatggctcg
cctggagagaaaggtaatgcgggtttacctggatttggttctcctggccttcaaggtggt
cctggaacctctggattgtcagttccgggtccacatgggcctccagggcagaaaggatct
cggggtcgagatggctggcctggtcaaagaggacaaataggagaccctggacctgatggt
atatctggacgtggaccagacggaaaaccagggaatacaggacaacctggaccaagaggg
gacccaggcccagacggagcaagaggtcgtcaaggaccccaaggcatggtgggggaccca
ggtgttagaggccctccaggacttccttgtccaacacgcttctacaatgggcctccggga
aaccccggagaaccaggaaatcctggattacttggtctcactggcgatcctggaagacct
ggaccaaaggggcagagaggaagagctggaccaccaggggatctggggcaaagaggtcct
cctggagaacctggcgttgatggccaagcgggatccgaagttaggcgaggaccagatgga
gccccgggagattctggtcataagggtcatcctgggctcaaaggagtgaagggagatcct
ggaattcctggaaggccgggaccagatggtgttccaggtccaacaggcagcaaaggagct
gctggagaaccaagctatgtgtacggaccacctggaccacctggacaaaagggtgaacca
gggtccagcagtgatgtcatgctcaggggacagaaaggggaacctgggattgcaggtcaa
gtaggtgctccaggaagccctggagccaaggggaacacaggacctgatggaaaaaatggt
tccccaggatttccgggtctaattggttctgatggtcctcccggaataaaaggacacatg
ggacctattggactaccaggcgttccaggcccaccaggccatactgggcaacgtggtata
aaaggaagccagggacttgatggtattcctgggccgccgggtcaaaaaggggacactgtt
ataataggaggagcacaaggaagacctggagatccaggcccaccaggtcctcctggggat
atcggtccgcctggtttgctcggcagagggagtccgggaccagaaggggacaggggaact
ccaggtctacctggacttcatggtgaatcaggactaccaggaagagaagggacttgtatt
ccaggacctaaaggtgatcgtggattccctggcaacccaggaaaccaaggctaccctggt
ccaccaggccctcaaggtctcagagtatcagggtcaaaaggagacagaggagagccaggg
ttcccaggaagcccaggttttggtgggcccccaggaaacccaggccctcaaggaccatat
ggtccaccaggtgtaaatggattcccaggactaagaggagacccgggtccctcagggaga
catggcccccttggtgacagaggagatcctggatacagcccaggtccatgtggtccacgt
gggcacaaaggtttccctggacacccgggtcgcaaaggtgaaccggcctatgttgacagg
atacacgaaccaggacctcctggattacctggtcctaaaggcaatccaggacttccagga
gcgattgggccaccaggatcacaaggaccgccaggaccacctggcgtcagaggaccacat
ggagtgagctctcctggtcctcctggattcactggccacacaggagacaagggaaaagca
ggattgccaggtcaagtaggcggaccaggaattcccggccgaaaaggactgagaggtttg
cctgggagagcagctacacattacacagatggctttctgattgccaggcacagtcagagc
attaaggtccccgactgccctaatggcaccagtctcatctactctggttattccctcctc
ttcgtcaatggaaacgagagagctcatggccaggaccttggcaccattggaagctgcctc
cctcatttctccaccatgcccttcctgttctgcgacacagaaagcacctgccgctatgct
tctcgtaatgactactcctactggctgtccactgataagctcatgcccgccaacatggtt
gccgtcacagctgataaagttgccccctacatcagcaggtgctcagtttgtgaaacagcc
tccaaaatcatagctttccatagccagaacactctgattcctgaatgtcccagaggttgg
gagaccctgtggactggttactcgtttataatgcaaaccggagcgggagcagaaggctcc
tcccaacccctgatgtctcccgggtcatgcatggaaaatttccgccgagtgccttttatt
gagtgtcacggcagaggcacttgtaattactaccctgattcctacagctactggctagcc
tcccttgacagaaacaacatgttcagtaaaccggttccccagactgtgaaaggattttct
ctgcagagagtcatcagtcgttgtcgggtctgcagaaaatcctga
DBGET
integrated database retrieval system
