Poecilia latipinna (sailfin molly): 106936168
Help
Entry
106936168 CDS
T08005
Name
(RefSeq) ATP-binding cassette sub-family A member 1-like isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
plai
Poecilia latipinna (sailfin molly)
Pathway
plai02010
ABC transporters
plai04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
plai00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
106936168
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
106936168
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
plai02000
]
106936168
Transporters [BR:
plai02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
106936168
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_23
Motif
Other DBs
NCBI-GeneID:
106936168
NCBI-ProteinID:
XP_014872490
Ensembl:
ENSPLAG00000020761
LinkDB
All DBs
Position
Unknown
AA seq
2392 aa
AA seq
DB search
MGFFRQLYLLLWKNVTYRRRNKIQLLIELLWPLFLFVILISVRHSHPPYKQGQCHFPNKA
LPSVGTVPWIQSIVCNINNPCFHSPTPGETPGQVGNFDNSILSRLFVDAQTVLSYSGNRS
FSSFQDLMGSVRLLGERFGSLPSRPVKEYLIPSETFSSFLLNNGNLSSSAVDQLMNARLN
FQALLTGVQMPLKVLVCNATLLGELLSVDGGAANMAALQNELCALPAGVLRDAERLFLSQ
LDMTKFLTRDRLIGSADELRIVSQAISSVSQELAVLIDDLSSLSSFAEMNAALSLLSPEN
RTALPRESFRAFSRIMCGHPKGGGERIPSLNWYEDNNIRSFLGRNDTEDVVLDTDNNTTP
FCKSLIQTLESNPLSRIVWRGIKPLFIGKLLYTPDTPVVRQVMKEVNKTFEDLQILQDLN
DAWMEVGPEIKNYMETSVEIQLLKNLLSRPEIAVLVNMRLENTTWTASRIVRFLSTPSPD
TPRKPGAPPTWLDVYNNIGNTVGTLSQVSKCFSLDKLEGLDSEGQLIDRALELLEDRQFW
AGVVFLLPNTSSSQLPPHVTYKIRMDIDDVTKTNKIKDRFWDPGPAADPFDDMRYIWGGF
VYIQDLVERAVSYVLTGVKQTTGIYVQQMPYPCYVDDVFLRVLNRSLPLFMTLAWIYSVA
MIIKGVVYEKEARLKETMRIMGLSTGTLWLSWFISSVVPFLISAVLLIGLLKWGDILPYS
DPTVVFFFLTAFATATIMQCFLISTFFSKANLAAACGGLIYFSLYLPYVLCVAWRDHLTT
THRVLASFLSPVAFGFGCEYFSQYEEQGVGIQWFNLRTSPVEGDSYSFTTSISMLYVDAF
IYAIAAWYIEAVFPGQYGIPRPWYFIFQLNYWGGIPLEAGMPIPPAPTHQDEDHIEAEPN
KLNLGVNIRNLVKIYKKGGKIAVNHLNLKFFEGQITSFLGHNGAGKTTTISVLTGLFPPT
SGTVYVKGMDIRYDMDIIRKTLGVCPQHNVLFDMLTVEEHVWFYGCLKGLPEEQVMAEMS
ALLEDVGLLHKRHDQTKNLSGGMQRKLSVAIAFVGGSKVVVLDEPTAGVDPYSRRGIWDL
LLKYRKDRTIILSTHYMDEAELLGDRIAIISKGKLCCSGSPLFLKSKLGSGYYLTLVKRE
ELSTSTPSYSSICTSASTSTNKLPPLVKDSESSLSEDTGLGSEDTSSYMAALLALVQQHI
PGARLVEESRREAVINLPQAAAKDGSLGLFLSKLDERLPELGVSSYGLSDSTLEEIFLRV
AEETGVDADPASEQPAEEPSGPQPSGQKAQDPSAEEPEPGRKRLRKKEPKETDPLSEDGR
GGTPLTGWWLTWQQLRALFVKRWLYARRSRRGLFAQIVLPAVFVLIALLFSLIVPPFGKY
PPLELQPWMYGDQYTFFSNDDPGNPAMENLLEALLDQPGFGTKCMQREEQDDNKTNPQCE
PERGGLFMRPQMSFSTWQMLSQGNWTRGRPSPECQCSTEDSRRMLPDCPDGAGGIPPPQM
KRATGDILQNLTRHNISDYLVKTYPQILKKSLKTKKWVNEFRYGGFSLGGSSTQNVSQVQ
HLQDSIMAIRTRYQVEQGSSLDRLLKKLPGFLGEMHTVNNVKVWYNNKGWHAMVSFVNVM
NNGLLRASLPPGPERRRHGITVYNHPLNLTKEQLTEIAMMTTSVDVLVSICVIFAMSFVP
ASFVLFLIEERVSKAKHLQFVSGVKPILYWLANFAWDMLNYSVPAMMVVLIFISFQQQSY
VSDTNLPALILLLLLYGWSITPLMYPASFVFSVPSTAYVVLTSINLFIGINGSIATFVLE
LFVDKHLNEVNRILKKVFLIFPHFCLGRGLIDMAKNQALADAFQRLGSKPTLHPLQWDFV
GKNLFAMAAEGVIFFIFTILLQYKFFIHFRPWWNDPQLPPLGPEDEDVARERERVKSGKA
QTDILTMIDLSKVYKAGKKPAVDRLCLGIPRSECFGLLGVNGAGKTSTFRMLTGDTPVTH
GEAFLNQHSVQTETERVHQLMGYCPQFDAISDLLTGWEHLELYARLRGVPEDSVGKVAQW
GVKKLGLTQYAGMEAGGYSGGNKRKLSTAISLIGAPPVIFLDEPTTGMDPKAKRFLWNCI
LSVTKEGRAVVLTSHSMEECEALCTRMAIMVNGRFQCLGSVQHLKNRFGDGYTIILRLAD
TKPDAESCPIDAYMRTSFPVIELKERHQSILQYQLPSHACCLARVFDLLANNYEELGVVD
FSVSQTTLDQVFVNFAKEQTDDDCLTDVIIGNGVAQLNLPARINPFAVKPQQPPTPPRLR
KSPQLPAKSPDGNPKEAKPKKAKARKVSSNGETSGGVPMSRSPQGEEVGPEAGSSNGGLQ
GESSKPHRSKHREESSSKDPATLFIVGSNSQESSLFIHLNAAEFTRTLWSQK
NT seq
7179 nt
NT seq
+upstream
nt +downstream
nt
atggggtttttcaggcagctctaccttctcctctggaaaaatgtcacgtaccgcaggcgg
aataagatccagctgttgatcgagctcctctggcctctcttcctctttgtcatcctcatc
tctgttcgtcattcacaccctccttacaaacaaggccaatgtcacttcccaaacaaagcg
ttgccgtcagtcggcaccgttccctggattcagagcatcgtctgcaacatcaacaacccc
tgcttccacagcccaacgccgggggaaacgccgggccaagtgggaaacttcgacaactcc
atactgtctcgtctttttgtggatgctcagacggttttgtcctacagtggaaatcggagc
ttctccagttttcaggacctgatgggaagtgtccggctcctgggggaaagatttggatcg
ctgccaagtcgccctgttaaagaatacctgatacccagtgagacgttctccagttttctc
ctgaacaacggaaacctgtcatcttcagctgtggaccagctgatgaacgctcgccttaat
tttcaggctttgctgactggagtccagatgccgctgaaagtcttggtgtgcaatgcaacc
ctgctgggagagctgctgtctgtggacggaggagccgccaacatggcggctcttcagaac
gagctttgtgcgcttcctgctggtgtcctgcgtgacgctgagcgcctcttcctctctcag
cttgacatgaccaagttcctcacaagagaccgtctaattggcagcgccgatgagctcagg
atcgtcagtcaggccatcagctcggtttcccaggagctcgctgtcctcatagacgatttg
tcctccctttccagttttgcagaaatgaacgcggctcttagtcttctgtctcctgaaaac
cgcacagctctgcccagagaaagcttcagagctttttcaaggatcatgtgcggccatccc
aaaggtggcggtgaacgcatcccgtcgctcaactggtatgaagacaacaacatcaggtcg
ttcttaggcagaaacgacacggaggacgtggtgctggacaccgacaacaacacaacacct
ttttgcaaaagtttgattcaaaccctggagtcgaatcctctttctcgcatcgtgtggcga
ggaattaaacctctgttcatcggaaagctgctgtacacaccggacactcctgtagttcga
caagtcatgaaagaggtgaacaaaacatttgaagacctccagattcttcaggatctgaat
gatgcctggatggaggtgggaccagaaatcaagaactacatggagaccagtgtggagatt
cagctgctgaagaatttgctgagccgtccagaaattgcagtcttggtgaacatgcgtttg
gaaaacacaacgtggacggcgtcgcggattgttcgtttcctgtccacgccgtcgccggac
acgccgaggaaacctggagcgccgccgacctggctggacgtctacaacaacattggaaac
accgtcggcacgctttcacaagtctccaagtgtttcagtttggacaagctggagggtctg
gactcggagggtcagctgatcgacagagctctggagctgctggaggacaggcagttttgg
gcaggtgtggttttcctgctgcccaacacgtcctcgtcgcagctcccgccccacgtcacc
tacaagattcgaatggacatcgatgatgtgaccaagaccaataagattaaagacaggttt
tgggatccgggtccagctgccgacccgttcgacgacatgcgctacatttggggcggtttt
gtctacattcaggacctggtagagagagctgtgagttatgtcctaacgggagttaaacag
accaccggcatctacgtccagcagatgccatatccctgttatgtggacgatgtcttcctt
cgagtgctgaaccgctccctgcctctcttcatgacgctggcgtggatctactcggtggcc
atgatcattaaaggcgtggtgtatgagaaggaggcccggctgaaggaaaccatgaggatt
atgggtctcagcacaggaacgctgtggctcagctggttcatcagcagcgtcgtccccttc
ctgatttctgctgtgctgctcattggcctccttaagtggggggatattttgccttacagc
gacccgactgtggtcttttttttcctcacggcgtttgccacagccaccatcatgcagtgt
ttcctcatcagcacctttttctccaaagccaacctggctgctgcctgtggagggctcatc
tacttcagtctctacctgccctatgtgctgtgtgtcgcctggagagatcacctcaccacc
acacacagggtcttagctagtttcctgtctcctgtggcctttggttttggctgtgagtat
ttctctcagtacgaggagcaaggcgtggggatccagtggttcaacctgcggaccagccct
gtggaaggagactcgtacagcttcaccacctccatatccatgctttacgtagacgccttc
atctacgccattgcagcctggtacattgaagcagtgtttcctggtcagtatggcatcccc
aggccttggtacttcatctttcagctcaactactggggtgggattcctttagaagcaggc
atgccgatccctccggctcccacccatcaggatgaagatcacattgaagcagaacccaac
aaattgaatcttggcgtgaacatcagaaatttggtaaaaatctacaagaagggagggaag
attgctgtcaaccatctaaatctgaagtttttcgaggggcagatcacctccttccttggc
cacaacggagccggcaaaaccaccaccatatccgtcctgactgggctgttccctcccacc
tctgggaccgtgtacgtgaagggcatggacatccgctacgacatggacatcatccggaag
acgctgggagtttgtccgcagcacaacgtcctctttgacatgctgacagtggaggagcat
gtgtggttttatggctgcctgaagggtttgcctgaagaacaggtgatggctgaaatgagc
gctctgttggaggacgtcggcctcttgcacaagcgtcatgatcagaccaaaaacctctct
ggtggaatgcagaggaagctttctgtggcaatcgcctttgttggcggctccaaagtggtc
gtcctggatgagcccacagctggcgtcgacccgtactcccgcagagggatctgggatctg
ctgctcaaatatcgcaaagatcgaaccatcattctgtccactcactacatggatgaggcg
gagctgcttggtgaccgcatcgccatcatctccaaggggaaactctgctgcagcggatcg
ccgctcttcctcaaatccaagctgggatctggttactacctgaccttggtgaagagggag
gagctaagcaccagcactcccagttattccagtatctgcaccagtgccagcactagcacc
aacaagctacctcctttagtaaaggacagcgagtcgtcactgagtgaagacaccggactg
ggaagtgaggacaccagttcctacatggcagctctgctggcgctggtgcagcagcatatt
cctggcgccaggttagtggaggagtctagaagagaagccgtgatcaacctgccgcaagca
gccgccaaggacggcagtctgggcctcttcctctccaaactggacgagcggcttccagag
ctgggcgtcagcagctacggcctgtcagacagcacgctggaggagatctttcttcgagtg
gcggaggaaaccggagtggatgctgatccagcatcggagcagccagcagaagagcccagt
ggcccgcagccatcggggcaaaaagctcaggatccatctgctgaggaaccagaaccagga
aggaaaagacttcgtaagaaagaaccgaaggagacggacccgctgagtgaagacgggcga
ggcgggacgccgctgaccggctggtggctgacgtggcagcagctccgagcgctcttcgtc
aaacgctggctgtacgctcgacggagccgccgggggctcttcgctcagattgttctgcca
gctgtgtttgtgctgatcgctctgctcttcagcctcatcgttcctccgtttgggaagtac
ccccccctggagctgcagccctggatgtatggagatcagtacaccttcttcagcaacgac
gatcctggcaacccagccatggagaacctgctggaggctctgctggaccagccgggtttt
ggcaccaagtgcatgcagagagaagagcaggacgacaacaaaacgaatcctcagtgtgaa
cctgagagggggggcctcttcatgcggccccagatgtcgttctccacctggcagatgctg
agccaaggcaactggaccagaggcagaccttccccagaatgtcagtgcagcacggaggac
tcccgccggatgcttccggattgcccggacggcgccggtgggattccccctccacagatg
aagagagccactggggatattctccagaatctgacgaggcataacatctcagattacctg
gtgaagacttacccgcaaatcctcaagaaaagccttaaaaccaagaagtgggtgaacgaa
ttcagatatggaggcttctctctcggaggcagcagcacccagaatgtctctcaggtccag
catctccaggactccatcatggcaatcaggactcgataccaagtagaacagggcagttca
ctggatcggctgctgaagaagctgccggggtttttgggagaaatgcacaccgtaaacaac
gtcaaggtgtggtacaacaacaagggctggcacgccatggtgtcgtttgtgaacgtgatg
aacaacggcctgctgagagccagtctgccgcccggaccggagcggaggagacacggcatc
accgtctacaatcacccgctcaacctcaccaaggagcagcttactgaaatagcaatgatg
acgacctcagtggacgttctggtttccatctgtgtaatcttcgccatgtccttcgtgccg
gccagttttgttctcttcctgattgaggagcgagtcagtaaagccaaacatttgcagttt
gtcagcggagtgaagccaatcctgtactggctggccaacttcgcctgggacatgctgaac
tattctgtcccggccatgatggttgtgctgatcttcatcagttttcagcagcagtcctac
gtgtccgacaccaacctgccggctctgatcctcctgctgctcctctacgggtggtccatc
actcctctgatgtacccagcatcctttgttttctccgttccaagcacggcttatgtcgtt
ctgacttccatcaacctcttcattggcatcaacgggagcatcgccaccttcgtcctggag
ttatttgtagataagcatctgaacgaggtcaacaggatcttaaagaaagtgtttttgatt
ttcccacatttctgcctgggtcgaggtctcatcgacatggctaaaaaccaagccctggcc
gacgccttccagagactgggaagcaaaccgactcttcaccctctacagtgggactttgtt
gggaagaatctgtttgcgatggcagctgaaggcgtcatcttcttcatcttcaccatactc
ctgcagtacaagtttttcattcacttcaggccgtggtggaacgatcctcagcttcctcct
cttggtccagaggatgaagacgtagcgagagaacgtgagcgagtgaaaagtggcaaagcc
cagactgatatcctcaccatgattgatctgagcaaggtttataaagctggaaaaaagcca
gctgtagatcgactttgcctcgggattccccgcagtgagtgtttcggcctgcttggcgtg
aacggagcagggaagacatccacgtttcgcatgctgactggagacacacctgtcacacac
ggagaggctttcctcaaccagcacagtgtgcagacggagacggagcgcgtccaccagctg
atgggctactgtccgcagtttgatgccatcagtgacctgctgacgggttgggagcatctg
gagctctacgctcggctcaggggggttccagaggattctgttggcaaagtggcgcagtgg
ggggtgaagaagctggggttgacccagtacgcagggatggaggctggaggatacagcgga
ggcaacaagaggaaactttccacggccatctccctgatcggagcgcctcctgttatattc
ctggatgagcccaccactgggatggacccaaaggccaaaagatttttgtggaactgcatc
ctgagtgtcacgaaagaaggcagagccgtcgtcctcacgtctcacagcatggaggagtgt
gaggctctttgcaccaggatggccatcatggtgaacggcagatttcagtgtctgggatcc
gtgcagcacctcaagaaccgattcggagacggatacaccatcattctccgtctggcggac
accaaaccggacgccgagtcttgtcccattgacgcctacatgaggacgtcgtttcccgtc
atcgagctgaaggagcgacaccagagcatcctgcagtaccagctgccatcgcacgcctgc
tgcctggcccgcgtctttgaccttctggccaacaactacgaggagctcggcgtcgtggac
ttctccgtctcgcagaccaccctggatcaggtgtttgtcaactttgcgaaggagcagact
gatgacgactgcctgactgacgtgatcatcggtaacggcgtggcgcagctaaaccttccc
gccagaataaatcctttcgccgtcaaaccccaacaacccccaacaccacctcggctgagg
aaatccccacagcttcctgccaaatcacccgacggcaatccgaaagaagccaagccgaaa
aaggccaaggccagaaaggtcagttcaaacggggagacgagcggcggcgtgcccatgagc
agatcacctcagggagaggaagtcgggccggaggcgggcagcagcaacggaggacttcag
ggggagtccagcaaacctcaccggtcgaaacacagagaggagagctccagcaaagacccg
gctacgctcttcatagtcggcagcaactcacaggaaagctcgctgttcattcacctgaat
gctgcagagttcacacgaactctctggagtcagaagtga
DBGET
integrated database retrieval system
