Poecilia latipinna (sailfin molly): 106936206
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Entry
106936206 CDS
T08005
Symbol
prpf38b
Name
(RefSeq) pre-mRNA-splicing factor 38B
KO
K12850
pre-mRNA-splicing factor 38B
Organism
plai
Poecilia latipinna (sailfin molly)
Pathway
plai03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
plai00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106936206 (prpf38b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
plai03041
]
106936206 (prpf38b)
Spliceosome [BR:
plai03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
106936206 (prpf38b)
Complex C
U4/U6.U5 tri-SnRNP related factors
106936206 (prpf38b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP38
Motif
Other DBs
NCBI-GeneID:
106936206
NCBI-ProteinID:
XP_014872541
Ensembl:
ENSPLAG00000019842
UniProt:
A0A3B3UT22
LinkDB
All DBs
Position
Unknown
AA seq
463 aa
AA seq
DB search
MANVGNQLPTQAVSKPSSGKHGNVLPLWGNEKTMNLNPMILTNVLSSPYFKVQLYELKTY
HEVVDEIYFKVTHIEPWEKGSRKTAGQTGMCGGVRGVGTGGIVSTAFCLLYKLFTLKLTR
KQVMGLITHTDSPYIRALGFMYIRYTQPPTDLLDWYNDFLDDEEELDVKAGGGCVMTIGE
MLRSFLTKLEWFSTLFPRIPVPVQKAIDQQMKARPRKVAQKEPEEEAEFTESGRQGERRR
SRTPRRTPSPKRSPKRSRSRSHHRERDRHGPSFDRELERERDRQRKERDGGRDRERDRAD
RGDRERRRSRSADRNRERKRSLSGSRERRGERREKERDGAEDRSRKKDRDHHKDRGMERD
RSRDRKSRAENDERRHKEDRDRHREDRKAKRSSRSRSRERRHKGGAEEKSRKRDRSHSRE
RERERDGERSHKRSRSKERSRHQRESSNEPSKHGERRRSQSTE
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atggctaacgtcggaaaccaactaccaacgcaggccgttagcaagccttcatcaggaaaa
catggcaacgtattgcccctatggggaaacgaaaagactatgaacctaaatccaatgatt
cttacgaatgtgctctcctcgccgtatttcaaagttcagctttatgaactaaagacctac
catgaagttgtggacgaaatctatttcaaggtgactcacattgagccctgggaaaaggga
agcagaaagactgcgggccagaccggaatgtgcggaggggtgcgtggagttggcactggt
ggcattgtatcaactgctttctgtcttctttacaaactgtttactctcaagctaacacgc
aaacaggtgatgggtctcatcactcacacagactctccgtacatcagggcacttggattc
atgtacataagatacactcagcctccaacagatttattagactggtataatgacttcctg
gatgatgaggaggagcttgacgtaaaagcaggcggcggctgtgtcatgaccattggggag
atgctgcgttccttcctgaccaagctggaatggttctccacgctgtttcccagaatcccc
gtgcccgttcaaaaggcgattgatcagcagatgaaggcgaggccacgtaaggtggcccag
aaggagccggaggaggaggctgagttcacagaatcaggaaggcaaggagaacgacgacgc
tccaggacgccgagacggacgccgagtcccaaaaggtctcccaagcgatcgagaagcagg
agccaccaccgggagagagaccggcacgggccgagcttcgaccgggagctggagagggag
cgggaccggcagaggaaggagagggacggggggcgggacagagagcgggacagggcagac
agaggggacagggaaagacggagatcacgtagcgcagacaggaacagagagcgcaaaaga
agcctcagcggcagcagagagcggcgaggcgaacgcagggagaaagagagggacggggca
gaagacagaagcaggaagaaagacagggatcaccacaaggacagagggatggagagggac
aggtccagagacaggaagagcagggcggagaacgacgagcggaggcataaagaagacagg
gacagacacagggaggacagaaaggccaaacggtcgagtcggagcagaagcagagaaagg
aggcataaaggaggagcggaggagaagagcaggaagagggatcgcagccacagcagagag
agggagcgcgagcgggacggggagcgctcccacaaacgcagccgcagcaaagagaggagt
cgccaccagcgggagtccagtaacgagcccagcaaacacggtgaacggaggagaagtcag
agtacggagtaa
DBGET
integrated database retrieval system