KEGG   Poecilia latipinna (sailfin molly): 106936206
Entry
106936206         CDS       T08005                                 
Symbol
prpf38b
Name
(RefSeq) pre-mRNA-splicing factor 38B
  KO
K12850  pre-mRNA-splicing factor 38B
Organism
plai  Poecilia latipinna (sailfin molly)
Pathway
plai03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:plai00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    106936206 (prpf38b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:plai03041]
    106936206 (prpf38b)
Spliceosome [BR:plai03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    106936206 (prpf38b)
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    106936206 (prpf38b)
SSDB
Motif
Pfam: PRP38
Other DBs
NCBI-GeneID: 106936206
NCBI-ProteinID: XP_014872541
Ensembl: ENSPLAG00000019842
UniProt: A0A3B3UT22
LinkDB
Position
Unknown
AA seq 463 aa
MANVGNQLPTQAVSKPSSGKHGNVLPLWGNEKTMNLNPMILTNVLSSPYFKVQLYELKTY
HEVVDEIYFKVTHIEPWEKGSRKTAGQTGMCGGVRGVGTGGIVSTAFCLLYKLFTLKLTR
KQVMGLITHTDSPYIRALGFMYIRYTQPPTDLLDWYNDFLDDEEELDVKAGGGCVMTIGE
MLRSFLTKLEWFSTLFPRIPVPVQKAIDQQMKARPRKVAQKEPEEEAEFTESGRQGERRR
SRTPRRTPSPKRSPKRSRSRSHHRERDRHGPSFDRELERERDRQRKERDGGRDRERDRAD
RGDRERRRSRSADRNRERKRSLSGSRERRGERREKERDGAEDRSRKKDRDHHKDRGMERD
RSRDRKSRAENDERRHKEDRDRHREDRKAKRSSRSRSRERRHKGGAEEKSRKRDRSHSRE
RERERDGERSHKRSRSKERSRHQRESSNEPSKHGERRRSQSTE
NT seq 1392 nt   +upstreamnt  +downstreamnt
atggctaacgtcggaaaccaactaccaacgcaggccgttagcaagccttcatcaggaaaa
catggcaacgtattgcccctatggggaaacgaaaagactatgaacctaaatccaatgatt
cttacgaatgtgctctcctcgccgtatttcaaagttcagctttatgaactaaagacctac
catgaagttgtggacgaaatctatttcaaggtgactcacattgagccctgggaaaaggga
agcagaaagactgcgggccagaccggaatgtgcggaggggtgcgtggagttggcactggt
ggcattgtatcaactgctttctgtcttctttacaaactgtttactctcaagctaacacgc
aaacaggtgatgggtctcatcactcacacagactctccgtacatcagggcacttggattc
atgtacataagatacactcagcctccaacagatttattagactggtataatgacttcctg
gatgatgaggaggagcttgacgtaaaagcaggcggcggctgtgtcatgaccattggggag
atgctgcgttccttcctgaccaagctggaatggttctccacgctgtttcccagaatcccc
gtgcccgttcaaaaggcgattgatcagcagatgaaggcgaggccacgtaaggtggcccag
aaggagccggaggaggaggctgagttcacagaatcaggaaggcaaggagaacgacgacgc
tccaggacgccgagacggacgccgagtcccaaaaggtctcccaagcgatcgagaagcagg
agccaccaccgggagagagaccggcacgggccgagcttcgaccgggagctggagagggag
cgggaccggcagaggaaggagagggacggggggcgggacagagagcgggacagggcagac
agaggggacagggaaagacggagatcacgtagcgcagacaggaacagagagcgcaaaaga
agcctcagcggcagcagagagcggcgaggcgaacgcagggagaaagagagggacggggca
gaagacagaagcaggaagaaagacagggatcaccacaaggacagagggatggagagggac
aggtccagagacaggaagagcagggcggagaacgacgagcggaggcataaagaagacagg
gacagacacagggaggacagaaaggccaaacggtcgagtcggagcagaagcagagaaagg
aggcataaaggaggagcggaggagaagagcaggaagagggatcgcagccacagcagagag
agggagcgcgagcgggacggggagcgctcccacaaacgcagccgcagcaaagagaggagt
cgccaccagcgggagtccagtaacgagcccagcaaacacggtgaacggaggagaagtcag
agtacggagtaa

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