Poecilia latipinna (sailfin molly): 106936656
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Entry
106936656 CDS
T08005
Name
(RefSeq) collagen alpha-4(IV) chain-like
KO
K06237
collagen type IV alpha
Organism
plai
Poecilia latipinna (sailfin molly)
Pathway
plai04510
Focal adhesion
plai04512
ECM-receptor interaction
plai04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
plai00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
106936656
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
106936656
09142 Cell motility
04820 Cytoskeleton in muscle cells
106936656
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
plai04147
]
106936656
00536 Glycosaminoglycan binding proteins [BR:
plai00536
]
106936656
Exosome [BR:
plai04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
106936656
Glycosaminoglycan binding proteins [BR:
plai00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
106936656
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
106936656
NCBI-ProteinID:
XP_014873277
LinkDB
All DBs
Position
Unknown
AA seq
1663 aa
AA seq
DB search
MSAGSGSATRRHPWIWCFLALITAPPGGQGGNLVEPCDGRDCTTCQCLPAKGARGFPGPL
GLQGPQGPPGFPGGRGLPGQKGGRGAEGPMGGFGIKGDAGSTGLQGFPGLDGVPGLPGPA
GGPGHPGLDGCNGTRGIRGNPGLPGEQGPNGEPGFTGPKGLKGEPSANFIQYPGAPGDDG
PGGLPGLQGEDGLPGPTGPAGPTGSAGLDGPPGSPGSRGPPGQKGRLLPGPKGDEGDQGP
QGPPGPFEYIDPPEDFYIKGEKGSPGEPGQRGVQGLPSRDAPPGTKGETGIVGFPGARGD
SGRPGPSGRKGARGMKGSQGLPGLIGQEGLKGFAGDPGPEGPCVIDDVTHIGDAGDPGFP
GRRGPPGDMGPMGDFGPPGFPGSSTPGLKGFDGPKGEPGYKGERGDPGQTTDEVAHGEPG
KPGQRGYRGPKGLQGLPGTVCLKGDKGDMGEPGDGGIPGPRGNDGSKGVPGECLCKSTDQ
KGPQGPPGPKGLPGSRGQPGPPGPKGEMGSSGDSGAEGVQGAKGFRGRSGQKGQKGFTVG
GLKGEKGEKGKVGPEGAPGTWGADGPPGRPGPPGDPGLKGDSASCFPGDKGFPGPPGLKG
FPGQLGPPGVSVEGPPGERGPPGNPGPDGFPGPPGLKGDPGDRGPCFSTPGPPGPKGDRG
QPGASGPPGAKGTAGIRGPDGPKGDKGLSHAPGPPGDRGPPGADGDPGEDGTDSCCNKGS
PGSPGPLGPTGLPGPRGNTHSGPQGPEGRPGSPGSPGRKGRLGPPGNQGAPGPQGPSGFP
GVKGHKGNVGAPGRPGPPGSTSDDCKARTPDGIGPPGPPGPGGPQGPRGPRGNKGEIGDK
GLPAIGPKGNIGEPGFPGSPGTQGREGPQGPVGDTGPMGPFGRKGQTGPRGFEGRPGFPG
NKGIPGGPGKPGERGPKGQDGGQGCAGPKGPKGHKGCAGPPGELIPRPEKGPRGPPGSSG
EPGFSGPRGNKGEAGCPGNTGYPGPNGPPGCKGPQGPQGPQGKQGPPGPPGTKGHQGYFG
FPGLNGEPGDPGCLGPPGRPGNPGRHGPKGDKGDTFDGPGPPGDKGHPGDRGPDGPCGPP
GDCGPKGLCGTQGQKGCKGHKGLQGSPGEPGVAGSPGPRGYQGLRGPPGRDGVDGPLGRN
GYAGNKGAPGSPGLHGLDGLSGQKGAKGSKGVCPGNSKSERGPPGPKGHPGPPGPPGPTC
PPKNGPPGPKGPTGPKGPPGDNGPPGPPGGDCKNPKPGPQGDPGDMGPDGDPGCPGEMGD
PGPNTPNCGDKGDTGDPGYLGPKGRRGYPGPPGPPGNPGNQGPKGMRGDSGFLGIPGERG
ARGHPGRPGPKGRPGCKGSDGPKGQKGRILPNGPPYSPVRGPRGPPGPPGASGDRGVRGE
IGPRGRNGMKGDPGADGAMGPRGQEGSLGQMGEPGQPGENGVLGEKGDPGPPGDPGPPGP
TGGMTPGFLLVKHSQSKVEPTCPPNTHLLWTGYSLLYLEGQEKAYSQDLGQAGSCVPVFS
TLPFSVCETKKCKYANRNDKSYWLSTMMPHPGHPFRGDTIKEYISRCVVCEAPSAAVAMH
DPNSSEPPNCPPNWSRLWTGYSFIMFSGGGDEGGGLSLMSPGSCLSQFKAQPFVECQGAR
GTCHFFANIYSFWLTTQSGTEGALTDSDQQRAHVAQCSVCIRM
NT seq
4992 nt
NT seq
+upstream
nt +downstream
nt
atgtctgccggttcaggctccgccacccggcgccatccatggatctggtgcttcctggct
ctgatcacagctcctcctggaggtcaaggaggcaacctggtggagccatgtgacgggcgg
gactgcaccacctgccagtgtttacctgccaaaggagcgaggggtttcccaggtcctctg
ggtctgcaggggcctcaggggcctccaggcttcccgggcggacggggacttccagggcag
aagggcggtagaggagccgaggggccgatgggaggttttgggataaaaggagatgctggc
tccaccggtctgcaaggttttccgggtttggacggagtcccgggcctccccggcccggct
ggagggcctggtcatccaggtctggacggatgcaacggaaccagaggaatccgggggaat
ccggggcttccaggggaacaaggccctaatggagaaccgggttttaccggtccaaaggga
cttaaaggagagccatcggccaacttcatccaataccccggagctcctggcgacgatggg
cccggcggactgccgggtctgcagggagaagatggtctgccgggaccaaccggacccgcg
ggtccaaccggatcagctggactcgatggccctcctggttcacccggatcaaggggcccg
cctggtcaaaaaggtcgattactgccgggaccgaaaggagacgagggagaccagggcccc
caggggcctccggggcccttcgagtacatcgaccctccagaggacttttacataaaaggg
gagaagggatctccgggggaaccaggacagcgtggcgttcagggactcccgagtcgggat
gcgccgcctgggaccaaaggagagacggggattgttggatttccaggagccagaggggat
tctggtcgacccggtccgtctggacggaaaggcgcccgggggatgaaagggagccagggt
ctcccaggactgataggtcaagaaggtttgaagggctttgctggtgatccgggccctgaa
ggcccctgtgtgattgatgatgtcactcacataggtgacgccggggatcctgggttccct
ggaaggaggggccctcctggcgacatggggccaatgggagactttggtcccccaggattc
ccaggatcatcaacaccaggacttaaaggttttgatggtccgaagggcgagcctgggtac
aaaggggagagaggagatccgggtcagactacagacgaagtggcacatggagaacctgga
aaaccgggacagcggggatatcgagggccgaagggactgcagggcctcccaggaacagtc
tgtcttaaaggagacaaaggagacatgggagagccaggtgatgggggcattccaggaccg
agaggcaatgatggcagtaagggcgttcctggtgaatgtctatgtaaatctactgaccag
aagggccctcaagggcctccagggcctaaagggcttccagggtcaagaggacagcccgga
cccccaggccccaaaggagagatgggttcctctggagactcgggagcggagggggtccag
ggagcgaagggcttcaggggacgcagcggccagaaaggacagaaaggtttcactgtgggc
ggcttgaaaggtgaaaagggagaaaagggaaaagtgggccctgagggggccccaggaacc
tggggcgcagacggacccccggggcgcccaggaccacctggagatccgggacttaagggg
gacagtgcgtcttgtttccctggagacaaaggcttccctggacccccaggactaaaagga
ttccctggacagctgggcccccctggagtcagtgtggaggggccccctggagagcgcggg
ccccctggaaacccgggacccgatggatttcctggaccgcctggactgaagggagatcca
ggagaccgtggcccctgtttttcgacccctggccccccggggccaaagggagaccgtgga
caaccaggtgcctcaggtcctccaggtgctaaaggcacagctggcatccgagggccagac
gggcctaaaggggacaagggactgtctcatgctccaggaccgcctggggaccgaggacct
ccaggtgctgatggagatcctggagaagacggaaccgacagctgttgtaacaaaggaagt
ccaggttctccggggccgctgggccccactggactccccggaccaagaggcaatactcac
agtggcccccaggggcccgaaggccggcctggatccccggggtccccaggacgtaaagga
cgcctcggccccccgggcaaccagggagcaccaggtccccaggggccttctggctttcct
ggagtgaagggacacaaaggaaatgtcggggcccctggacgaccaggccccccggggtcc
acatcagatgattgtaaggcaaggacgcctgatggcataggccctccaggccctccggga
cctggtggccctcaaggacctcgtggccctcgcggtaataaaggtgaaattggggataaa
ggtcttccagctattggtccaaaaggcaatattggagaacctggatttccagggtctcca
ggtacacagggacgtgaagggccccaaggccctgttggggacactggcccaatggggccc
tttggtaggaaaggtcagactgggcccaggggctttgaaggaaggccaggttttccagga
aacaagggcatccctggaggcccaggcaagcccggagagcgggggcctaaaggacaagat
ggaggtcagggttgtgcaggaccaaagggaccaaaaggtcacaaaggttgtgccggtcct
ccaggagaactcattcccagacctgaaaagggcccaaggggaccaccaggatcctccggc
gagcccggattctccggaccacgaggaaacaaaggtgaggctggatgcccaggaaatact
gggtatccaggccccaatggacccccaggctgtaagggacctcagggaccccaagggccc
cagggtaagcaaggcccgcctggacctccaggaaccaaaggacatcaaggatacttcgga
tttcctgggctgaatggagaaccgggcgacccaggatgtctgggaccccctgggagacct
ggtaatccaggacgtcatggacctaaaggtgataaaggagacacctttgatggtcctggt
ccacctggagataagggccatcctggggacagaggccctgatggcccttgtggccctcct
ggagattgtggccccaaaggcctctgtgggacacaaggacagaaaggatgcaagggacac
aaaggattacaaggatcccctggagaaccaggtgtggctggttctccagggcccagaggt
taccaggggcttcgagggcctcctggtcgagatggagtggacggtcccctggggaggaat
ggttacgcaggaaacaaaggagctccgggatcaccagggcttcatggattagatggactg
agtggacagaaaggagccaaggggtccaaaggtgtatgtccgggcaacagtaaaagtgaa
agaggccctccaggccctaaaggtcatccaggtcctccaggtcctccaggtcccacttgt
ccacccaagaacggcccaccaggaccgaaaggtccaacgggacccaaagggcctccaggt
gataatggaccgccaggtccgcctggaggcgactgtaaaaacccaaaaccagggccacag
ggggatcccggtgatatgggcccagatggagatccaggttgtcctggtgaaatgggagat
cctggtccaaatacaccaaattgtggggacaaaggagacaccggtgatccagggtacttg
gggccaaaaggacgccgtggatatccggggccaccaggaccaccaggcaaccctggaaac
caaggccccaaaggtatgagaggcgactcgggtttcctgggcatacctggagaacggggt
gcgaggggtcacccgggtcgcccagggcccaaaggaaggcctggatgcaaaggatcagac
ggtccaaaggggcagaaaggccgaatcttaccaaatggccctccctactcaccggttagg
ggccctagaggaccacctggccctcctggagctagcggagatcggggcgtgaggggcgaa
attggccccagagggaggaatgggatgaagggggatcctggggctgatggagcaatgggc
ccccggggacaagaaggttccttaggacaaatgggagagccaggccagcctggagagaac
ggagttctgggagaaaaaggtgatccgggtccccccggtgacccaggtccaccaggaccg
accggaggcatgacaccagggttcctgttggtgaaacacagccaatcaaaggttgaacca
acatgtccgccaaatacgcatctgctttggactggatacagcctgctgtacctggagggc
caggagaaggcgtattcccaggatctgggtcaggccggttcctgcgttcccgtgttctcc
accttgccgttctccgtctgcgagaccaaaaagtgcaaatacgccaatcgaaacgacaaa
tcctattggctgtcgacgatgatgccgcatccaggccatccattcagaggagataccatc
aaggagtacatcagtcgctgtgtggtgtgtgaggcgccctctgctgccgtggccatgcat
gaccccaactccagcgagccaccaaactgcccccccaactggagccgcctgtggaccgga
tattccttcatcatgttttcaggtggcggtgatgagggcggcggcctctctctgatgtcg
ccgggcagctgcctgtcgcagttcaaagcccagcccttcgtggagtgtcagggcgcccgg
ggaacctgccacttcttcgccaacatctacagcttctggctgaccacccagagcggcacc
gagggcgcgctgaccgactccgaccagcagagggcgcacgtcgcccagtgcagcgtctgc
atccgcatgtga
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integrated database retrieval system
