Poecilia latipinna (sailfin molly): 106937022
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Entry
106937022 CDS
T08005
Name
(RefSeq) probable ATP-dependent RNA helicase DDX5 isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
plai
Poecilia latipinna (sailfin molly)
Pathway
plai03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
plai00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106937022
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
plai03041
]
106937022
03009 Ribosome biogenesis [BR:
plai03009
]
106937022
Enzymes [BR:
plai01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
106937022
Spliceosome [BR:
plai03041
]
Complex A
U1 snRNP components
U1 related factors
106937022
Complex B
106937022
Ribosome biogenesis [BR:
plai03009
]
Eukaryotic type
Pre-60S particles
Helicases
106937022
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
Cas3-like_C_2
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
106937022
NCBI-ProteinID:
XP_014873802
Ensembl:
ENSPLAG00000014263
UniProt:
A0A3B3UE49
LinkDB
All DBs
Position
Unknown
AA seq
628 aa
AA seq
DB search
MPGYSDRDRGRDRDRGYGGGPPRFGGSRSGGGGKFGNPGERLRKKHWNLDELPKFEKNFY
QQHPDVACRSLQEAEQYRRSKTITVKGRDCPNPITQFHEASFPSYVMEVINKQNWTEPTP
IQAQGWPLALSGMDMVGIAQTGSGKTLSYLLPAIVHINHQPFLERGDGPICLVLAPTREL
AQQVQQVAAEYGRASRLKSTCIYGGAPKGPQLRDLERGVEICIATPGRLIDFLEAGKTNL
RRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKEYVQ
INIGALQLSANHNILQIVDVCNDGEKENKLIRLLEEIMSEKENKTIIFVETKRRCDDLTR
RMRRDGWPAMGIHGDKSQQERDWVLNEFKFGKAPILIATDVASRGLDVEDVKFVINYDYP
NNSEDYIHRIGRTARSQKTGTAYTFFTPNNMRQASDLVSVLREANQAINPKLLQMAEERG
GRSRGGRGGDYDRRDRYSSGRRDFGGGRDRDNNRGYNNGPNKSYGAGSQNGGYGGSNGAS
NGYGGGNYNNNGQSNFGTNQAGAFVAQNNFQAQQFVPNKPVAQNGTSHPQYQFPQAQVPP
QLPPQQLAPQQHPPPPLVPYPMPPQFSQ
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atgcctggatattcagacagagaccgcggcagagatagagacagaggttatggcggtggt
ccaccccgattcggtggtagccggagtggaggtggaggaaagtttggcaatccaggtgag
cgattgaggaagaaacactggaacctggatgagctcccaaagtttgagaaaaacttctat
cagcagcatcctgatgtcgcctgtagatcactgcaagaagctgagcaatacagaaggtcc
aaaactattacagtgaaggggagggactgcccaaatcccataactcagttccatgaagca
agctttccctcttatgtgatggaggtcatcaacaaacagaactggactgaaccaacacct
atccaggctcagggttggcctttggctctcagtggcatggacatggttggcattgcacag
actggctctggcaagacactttcttatcttctgcctgcaattgtgcacattaatcaccag
cctttcttggagcgtggggacggtccaatttgtctggtgttagcccccactcgtgagctg
gcccagcaggtgcaacaggtggctgctgaatatggcagagcttctcgtctgaagtccacc
tgcatctatggaggcgcaccaaaagggcctcagctccgtgatttggaaaggggtgtggag
atttgcatcgccactccaggcaggctcattgacttccttgaagcaggaaaaacgaacctt
cgcagatgcacttacctggtgctggatgaggcagacagaatgctggacatggggtttgag
ccacagatcaggaagattgttgaccaaatcaggcctgacaggcagactctgatgtggagt
gctacttggcctaaagaggttcgccaactggcagaagactttctgaaggagtatgttcag
atcaacattggtgcactgcagcttagtgctaaccataacatcctgcagattgtggatgtc
tgcaatgatggagaaaaagagaataagctaatccgtctgcttgaggaaatcatgagtgag
aaggagaacaagaccatcatttttgttgagacaaaaaggcggtgtgatgacctcactcga
cgaatgagaagagatgggtggccagctatgggaatccatggcgacaaaagccagcaggag
agggactgggtccttaatgagttcaaatttggcaaagcccccatactgatcgccactgat
gttgcgtccagaggcctagatgtggaagacgtgaaatttgtcatcaactatgactaccct
aacaactctgaggactatatccatcgcattggcagaacggctcgtagccaaaagactggc
acggcctacaccttcttcactcccaacaacatgaggcaggccagcgaccttgtctctgtg
ctgcgcgaggccaaccaggcaattaacccaaagctcctccagatggcagaagaaagagga
ggtcgttcaaggggcggcagaggtggtgactacgaccgtcgggataggtattcctctgga
aggcgtgattttggcggcggtagggatagagataacaatagaggatataacaacggacca
aacaagagttatggcgcaggttctcagaatggaggctatggaggcagcaacggtgccagc
aatggttacggtggagggaactacaacaacaatggacagtcaaacttcggcaccaatcaa
gcaggagcttttgttgcccaaaacaacttccaggcccaacagtttgttcccaataagcct
gttgcacaaaatggcacaagccatcctcagtaccagttccctcaggcccaggtgcctcct
cagcttccaccccaacaacttgcccctcaacagcatcctccaccacctctggtgccatat
cccatgcctccacagttctctcagtaa
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